Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01053 AAACAATACAAAAAAACACAGCAAATACAGCTCTCTCCTCTTCTCTTCTTCTATTTATATACACGTATTTTTTCCCATATTTTCTCATTTATCAAGAAAGAGAAAGAGCAGCAGCCAAAATAGAGAAGAGAGAGAAAGTTTAGATATTCCTGAAACTGAGTACAACTTGTAACAATATAATACAGATATGTCGGAGGTTAAAGAACCGGCGATAAAGCTTTTTGGGAGGACGATTTCTTTGCCATTCGACCGCCAAATTTCTGCCAATGACTCTTCTCCTCCTGCTTCTGAAGATTGGTCTCACAATAGTCCTCCTTCATCTTCGTCTTCTCCGCCTGAAGAGACCTCTGGACTAAGAGAACCTCAAGCACATGAGGATAAGGAACTATCACCAGGAAAAGAACTCACCTCAGTTCAAGAAGATGCTACCTCACATCAAATTACAGAGGATTTGAAGTCTCCGACAACATCTTCAGGCATTTTTGAGAACCCTAAGACTCCCTCAGCTGAAAGAGAGACATCTTTACTGAAATCCTCTAAGAATGGAGAGCAAAGTGAGACAAGTGTTTCGCAAGAAAAGACTCTCAAGAAGCCTGATAAGATCCTTCCATGTCCACGATGCAATAGCATGGACACCAAGTTTTGTTACTACAACAATTACAATGTCAATCAGCCCCGTCATTTCTGTAGGAACTGTCAGAGATACTGGACTGCTGGAGGAACCATGAGAAATGTGCCTGTAGGTGCTGGTCGCCGCAAGAACAAGAACTCTTCTGCCTCTCATTATCATCACATAATGGTTCCTGATCCCCTTCAAACATCACAAGCCAATGTGCCCAACGGATTGCATGCTGTTTTGGGAAATGGAGCAGCTTTTTTGACCTTTGGCACAGATTCTCCTCTTTGTGATTCCATGGCTTCTGTCTTGAACCTTGGAGAGAAAGCACAAAATGGTGTCCTAAATGGGTTTCATGTACCTGATCAACATAATAGGGAAGATCCCCCAGTTGGAGTTTCTGCTTCTGTCACAGCTTCAAATTCATCGGAGAAGAGAGCAAGTGTTGGCTTGCAAGAATCAGTAGACAAAAGTTATCAAGGTTTCCCTCCACAATTGCCATGCTTCCCCAGTTCCCCATGGCCTTATCCTTGGAACTCGGTGCAGTGGAACTCTCCAGTGCCTCCACCTACATTCTGCCCACCAGGCTATCCAGTGTCATTCTATCCCTCACCTGCATATTGGGGTTGCACTCTACCAGCCTCATGGAATATGCCTTGTATGTCTCCACAATCTTCTGTGAGCCACTCTTCCCCTGGTTCTGGCCCTAACTCACCCACCTTGGGGAAACACTCAAGGGATGGAAACATCCTAAGTCCAGCCAACTCACAGAAAGACAAGCCTGACAAAGAGAGCAACAACAATTCAGAAAGCAATGTCTTGATCCCCAAGACACTGCGTATCGATGATCCCAGTGAAGCTGCAAAGAGTTCTATATGGTCAACACTGGGGATCAAGAATGAAAAAGGCAACTCTCTCAATGGAGAAGGCCTTTACAAGGCATTTCTGTCCAAGGGAGATGACAACAATCACATCATTTACACATCGCCGGTGCTGCGAGCCAACCCTGCAGCATTTTCGCGGTCTCGTACCTTCCATGAGAGGACCTAA 1666 0.4466 MSEVKEPAIKLFGRTISLPFDRQISANDSSPPASEDWSHNSPPSSSSSPPEETSGLREPQAHEDKELSPGKELTSVQEDATSHQITEDLKSPTTSSGIFENPKTPSAERETSLLKSSKNGEQSETSVSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCRNCQRYWTAGGTMRNVPVGAGRRKNKNSSASHYHHIMVPDPLQTSQANVPNGLHAVLGNGAAFLTFGTDSPLCDSMASVLNLGEKAQNGVLNGFHVPDQHNREDPPVGVSASVTASNSSEKRASVGLQESVDKSYQGFPPQLPCFPSSPWPYPWNSVQWNSPVPPPTFCPPGYPVSFYPSPAYWGCTLPASWNMPCMSPQSSVSHSSPGSGPNSPTLGKHSRDGNILSPANSQKDKPDKESNNNSESNVLIPKTLRIDDPSEAAKSSIWSTLGIKNEKGNSLNGEGLYKAFLSKGDDNNHIIYTSPVLRANPAAFSRSRTFHERT 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01053 492 MobiDBLite consensus disorder prediction 265 294 - -
Bach10g01053 492 ProSiteProfiles Zinc finger Dof-type profile. 140 194 IPR003851 GO:0003677|GO:0006355
Bach10g01053 492 ProSitePatterns Zinc finger Dof-type signature. 142 178 IPR003851 GO:0003677|GO:0006355
Bach10g01053 492 MobiDBLite consensus disorder prediction 277 294 - -
Bach10g01053 492 MobiDBLite consensus disorder prediction 20 54 - -
Bach10g01053 492 MobiDBLite consensus disorder prediction 74 127 - -
Bach10g01053 492 MobiDBLite consensus disorder prediction 56 72 - -
Bach10g01053 492 PANTHER CYCLIC DOF FACTOR 2 1 492 IPR045174 GO:0003700|GO:0006355
Bach10g01053 492 MobiDBLite consensus disorder prediction 365 421 - -
Bach10g01053 492 Pfam Dof domain, zinc finger 137 194 IPR003851 GO:0003677|GO:0006355
Bach10g01053 492 MobiDBLite consensus disorder prediction 365 399 - -
Bach10g01053 492 MobiDBLite consensus disorder prediction 13 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01053 Bach-Chr10 7779498 7782654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01053 4 490 C2C2-Dof Transcription Factor Family AT5G39660 42.157 5.33e-101 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bach10g01053 zf-Dof 3.6e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g01053 - - zju:107429011 624.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g01293 4 9056171 9059836 Bach10g01053 10 7779498 7782654 BWGD
Bach10g01053 10 7779498 7782654 Bach2g02009 2 27651261 27653937 ECH
Bach10g01053 10 7779498 7782654 Bach10g01053 10 7779498 7782654 ECH
Bach4g01293 4 9056171 9059836 Bach10g01053 10 7779498 7782654 ECH