Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01044 ATGGATTTGACTCCAAGCAGCACCCACACCGTAGGTACAGATACTCAAACCCCACCACCTACCCATCTCACCAACAACACCAAGTCTTTGTCTTTCACCAACGGCACCCTCAAGCGCCACCACCAATTAGCCCCATCACAGCCACAGCCACCAAATATGATGGTTTCCTACAAGGAATGCCTCAAGAACCACGCCGCCACCATAGGTGGTCACGCCCTTGACGGTTGCGGTGAGTTCATGCCTTTACCCACTTCCAACCCCACTGACTCTCGCTCCTTAAAATGCGCTGCATGTGGCTGCCACCGCAACTTCCATCGTCGTAACCCGCAGGAATTCGTTAATCCCAGTTTTCTTAACTGCTTCCGCTCGCCGGCAGCTGCAGCCCCGCCACGGCCACTTCCACCGCACCTGGGGTTAAGCCCTAGTACAAGTCCGAGCATGAGCACAAGCCCAAGCCAAAGTCCAAGCCCCAGTTCAAGTCCTTCACCGCCACCGGTTTCGCGTTTTCCACCTTCCCCGTTTCATGCATCAGCACCTCACATCCTGTTAGCGATGGGCACCACTTATTCTGGGCCTTCCAAGGAGCAGCTCTGGAACTTCAATTCCACAGTGATGAAGACGGAAAACCCAAGTGGGAAAAAGAGGCACAGAACGAAATTTAGCCAGGAGCAGAAAGAGAAGATGTATTTGTTTTCTGAGAAATTGGGATGGACAATGCAGAAAGCGGATGACAGATTGGTACAGGATTTCTGCAATGAGTTGGGCGTTTCAAGAAGGGTGTTCAAGGTTTGGATGCACAACAACAAACACACTTTCAGGAAGAGATCAGAAATGGGTAATGCTACTCAGAGTGAGAAAACCAGTGAAGATGAGGAGAACGTTAATGGCAATGGCCATGGTAGAGCTGGAGGTGGCTTTGATAGTGATATTAACAATCCTCACAACAATACAAACAGAAGCGACGGTGAATTCACAGAAATGAAGGTAGCTCTGTGA 996 0.503 MDLTPSSTHTVGTDTQTPPPTHLTNNTKSLSFTNGTLKRHHQLAPSQPQPPNMMVSYKECLKNHAATIGGHALDGCGEFMPLPTSNPTDSRSLKCAACGCHRNFHRRNPQEFVNPSFLNCFRSPAAAAPPRPLPPHLGLSPSTSPSMSTSPSQSPSPSSSPSPPPVSRFPPSPFHASAPHILLAMGTTYSGPSKEQLWNFNSTVMKTENPSGKKRHRTKFSQEQKEKMYLFSEKLGWTMQKADDRLVQDFCNELGVSRRVFKVWMHNNKHTFRKRSEMGNATQSEKTSEDEENVNGNGHGRAGGGFDSDINNPHNNTNRSDGEFTEMKVAL 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01044 331 Gene3D - 200 274 - -
Bach10g01044 331 MobiDBLite consensus disorder prediction 140 155 - -
Bach10g01044 331 MobiDBLite consensus disorder prediction 1 29 - -
Bach10g01044 331 NCBIfam homeobox domain, ZF-HD class 213 269 IPR006455 -
Bach10g01044 331 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 57 108 IPR006456 -
Bach10g01044 331 MobiDBLite consensus disorder prediction 274 296 - -
Bach10g01044 331 Pfam ZF-HD protein dimerisation region 55 109 IPR006456 -
Bach10g01044 331 MobiDBLite consensus disorder prediction 309 323 - -
Bach10g01044 331 MobiDBLite consensus disorder prediction 129 173 - -
Bach10g01044 331 MobiDBLite consensus disorder prediction 274 331 - -
Bach10g01044 331 MobiDBLite consensus disorder prediction 156 172 - -
Bach10g01044 331 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 31 272 - -
Bach10g01044 331 SUPERFAMILY Homeodomain-like 207 274 IPR009057 -
Bach10g01044 331 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 57 108 IPR006456 -
Bach10g01044 331 FunFam Zinc-finger homeodomain protein 2 200 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01044 Bach-Chr10 7706817 7707812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01044 53 272 ZF-HD Transcription Factor Family AT1G69600 47.556 1.98e-60 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Bach10g01044 ZF-HD_dimer 2.5e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g01044 - - vum:124843063 327.02