Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01041 ATGGATGAGAGAAATGATACTGAGAAACTTGATGAAGTTATGCTACCAGGGTTTAGGTTTCATCCAACTGATGAGGAGCTTGTAGGGTTTTATCTTAGAAGAAAGATTCAGCAGAGGCCTCTGTCCATTGAACTCATCAAGCAGCTTGATATCTACAAATATGATCCATGGGATCTTCCAAAGTTAGCCGCTACAGGAGAGAAAGAGTGGTACTTTTACTGTCCAAGAGACAGAAAATACAGAAACAGCGCAAGGCCTAATAGGGTAACAGGAGCTGGATTCTGGAAAGCCACAGGAACTGATAGGCCTATCTACTCCTCTGAGGGTTCAAAGTGCATAGGGTTGAAGAAATCCCTTGTTTTCTACAAAGGTAGAGCTGCCAAAGGAGTCAAAACTGATTGGATGATGCATGAGTTCCGCTTACCTTCTCTCATAGACTCATCTTCACCAAAGAAGTACATAGACAAAGCCATTCCAGCTAATGATTCATGGGCAATATGCAGGATATTCAAGAAAACTAATTCTACAGCCCAAAGAGCTCTTTCTCACTCTTGGGTCTCTCCATCACCTGAAACAAACACCTCTGATTTGCTAACCAAAGATGAAGTTAGTCCTCAGTTTTGTTCAGAGCCATTGACAAAGAAAACAGGCTTAAACAGCCAGTTTTATACTAACCACGGTGACATACAACAGTTAACAACTTGTAACTGTAGCCCTCTTTGTGGCTTAGATAGTGGTTTTTTCAAACCCATTATTAATAATCCATTGCTTTATAAACCCTTTGATCAATTGCCCATTTCAAATGGGGACCTTGCCGCTAGTTTAACGTTTTCATCTCCCCTTGAAACTTGTACTGCTACAGCCAAAACCTCATTGGATGTTTCTTCCATGTTGCTGAATATGTCATCTTCTGTGTTAGGAGATTTTGGTAAGGCTTCTGAGGGTATAAACCTTGGTGGGTTTGAAGATCATGGTCATAATGGTAATTATCCCATGCCTTTATTACGTGAGATGCAAGGGACACTTGACAATGTAGATGACGCTGGAATGGTGAAGATTCCTAATATGAATGTGCCTCCTGGAGGTGATCTGCAAGAGTTGGGGACAGTTCGATCTATTGGGTTTCCATTCAGCTTGCCACTGAATATTGGTGAAGCATGGAAATCAAATCTACTTTGGGATACTTCCCCCTGTCCTTGTGACGTGCCCTCAGCTTTTTCCACAACCAAGTGCTACACTTAG 1242 0.4179 MDERNDTEKLDEVMLPGFRFHPTDEELVGFYLRRKIQQRPLSIELIKQLDIYKYDPWDLPKLAATGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSEGSKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRLPSLIDSSSPKKYIDKAIPANDSWAICRIFKKTNSTAQRALSHSWVSPSPETNTSDLLTKDEVSPQFCSEPLTKKTGLNSQFYTNHGDIQQLTTCNCSPLCGLDSGFFKPIINNPLLYKPFDQLPISNGDLAASLTFSSPLETCTATAKTSLDVSSMLLNMSSSVLGDFGKASEGINLGGFEDHGHNGNYPMPLLREMQGTLDNVDDAGMVKIPNMNVPPGGDLQELGTVRSIGFPFSLPLNIGEAWKSNLLWDTSPCPCDVPSAFSTTKCYT 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01041 413 ProSiteProfiles NAC domain profile. 14 172 IPR003441 GO:0003677|GO:0006355
Bach10g01041 413 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 209 - -
Bach10g01041 413 Gene3D NAC domain 23 177 IPR036093 GO:0003677|GO:0006355
Bach10g01041 413 FunFam NAC domain-containing protein 35 23 175 - -
Bach10g01041 413 SUPERFAMILY NAC domain 13 172 IPR036093 GO:0003677|GO:0006355
Bach10g01041 413 Pfam No apical meristem (NAM) protein 16 141 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01041 Bach-Chr10 7694003 7695467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01041 1 309 NAC Transcription Factor Family AT1G26870 55.828 2.48e-109 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bach10g01041 NAM 4.5e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g01041 - - vra:106768003 552.362