Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01033 ATGGCTGATCCTCAGAGGACGGGTGTCGGCGAGAGGGATATCGAGCAGGCCATTACATATCTTAAAAAGGGCGCATATCTGCTAAAGTATGGGCGCAGAGGGAAGCCAAAGTTCTGCCCATTTAGGCTTTCCAATGACGAGTCTCTACTTATATGGTACTCTGGAAAGGAGGAGAAACAACTTAAGCTCAGTACTGTCTCAAAGATTATTCCTGGGCAGCGAACTTCAACATTTCAGCGGTATCCTCGGCCTGAAAAGGAATATCAATCATTTTCTCTAATATATAATGATAGGTCCTTGGATTTGATATGTAAGGACAAGGATGAAGCAGAAATTTGGTTTGTTGGTCTTAAGGCATTAGTTACTCGAGGTAACACTCGTAAGTCGAGACATGACACAAGATCTGACATGTTGTCTGATAGTTCACAATCACATTCTCGAAGAACTACTCCATCAGCTTCACCATTGGATCCAGGAGATATTGAAGGAGTTTCTTTTGAAACTTATTCACAAAAAAGATTGGGAAGGGCTTTCTCTGAAATAATTTCGTTTACTGCAACTGGCAAGGCTTCTAGTAAAGACGAATCAATTGCAAATTCATCTTTATCCTCTGGATCTGTGGAGAATTCAAATAATCGAAATTCTGCAGCTGAGGCATTTCGAGTTAGTTTATCAAGTGCTGTAAGTTCATCCAGCCAGAGTTCTTACCATGAAGATTTTGATGGCTTAGGCGATATTTTTATTTGGGGAGAAGGTGTTGGTGATGGAATACTTGGTGGTGGTATGCATAGAGTTGGAACCTTACCTAGTTCTATTATGGATGCATTTCTCCCCAAGGCATTGGAGTCAAAAGTAGTTCTAGATGTTCATAGTATAGCCTGTGGTTACAAACATGCTGTTCTAGTTACCAAGCAAGGAGAGATATTCAGTTGGGGAGAGGAGTCTGGTGGTAGGCTTGGCCATGGTGTAGAAACAGATGTTTCCCACCCTAAGCTCATTGACACTCTTAGTGGCATGAATGTTGAGTTGGTAGCATGTGGGGAATATCATACTTGTGCTGTTACGTTTTCTGGGGATCTCTACACATGGGGAGATGGTACCCACAATTGTGGTTTACTTGGCCATGGAACTGAAGCCACTCATTGGATTCCTAAGAGGGTAAGTGGTAACATGGAGGGTGTACATGTATCTTATGTATCCTGTGGACCTTGGCACACAGCTATTGTGACATCAGCTGGTCAGTTATTTACAATTGGGGATGGATCTTTTGGTGCATTAGGCCATGGAGATTATAGTAGCACAAATATTCCTCGTGAAGTAGAAACTTTGAGAGGGTTGAAAACAACCAAGGTTTCCTGTGGTGTTTGGCACACTGCTGCAGTTGTTGAGGTGATAAATGAATCTGTGGAATCTTCTGGGGGCTCTCCTATTGGAAAACTGTTCACCTGGGGGGATGGAGATAAAGGGCGACTAGGGCATGGCAATAAAGAACCTAGACTAATTCCTGAACGTGTAACTGCTTTGGATAATGAAAATATTTGTCGAGTGGCTTGTGGCCACAATCTTACAATTGCTTTGACAACCTCAGGACATGTTTACACAATGGGAAGTACTGCTTATGGACAACTTGGCAATCCTGCAGCTGATGGAAATGTCCCTAAACGTGTTGGAGGTAAAATTTCTTACAGTTTTATCGAAGATATTGCTTGTGGTTCTTACCATGTTGCTGTCCTGACTTCCAAGACCGAGGTTTACACCTGGGGGAAGGGTTCAAATGGGCAGTTAGGTCATGGAGATATTGATCACAGAAATACACCCACACTTGTAGCAAATTTAAAAGATAAGCAAGTGAAGAGTGTTGCTTGTGGATCCAACTTCACTGCTGTTGTGTGCCTTCATAAATCAGTATCAGGTGCTGACCATTCTGTGTGCTCTGGTTGTCACAATCCATTTGGATTCAGAAGAAAGCGCCATAATTGTTACAACTGTGGACTAGTTTTTTGCAATGCATGCAGCAGTAGAAAATCTACTAAAGCTTCCCTTTCTCCAAATAACAACAAGCCATATCGTGTTTGTGATGATTGTTATTCTAAACTAAATAAACCTACAGAATCCATTTCCTTGGGGCAAACTCCTTCCTCAAAAAGTGGAAGTACAAATGACTTGAAGGCTCCTAAATTACAGGGAACACTATCAAGGCTTTCATCTTTTGGTTCTATCCTTCAAGCAGAAAGCCGACAAGCAAAGCCTTCAGAATCAAATGACAGCCACATTTTTCCAGCTTTGAATGGAAAATTACAGTTGGGCAGTTTCAGTCCTTCAAAAGCATCAAATTCTCTTGCTGGAGTATCATCAAGGAAGCCCCTTTCAAATTCTGTGCCTTCTACTAGATTAGCTTCTCAAGCAACATCTCCAGTTTCGACAAAGTCAAGTCCGTGCCAGTCTCACGAAGATACACAGGATGAGTCTAAACAAAGAAATGAGATTCTTAATCAAGAAGTTACAAGTTTAAGGGCACAGGTTGAAGATCTTACTCGAAAATCCAAAATACTTGAGACTGAGCTTGAAAGGACATCAAAGCAATTGAAAGAAGTCACTGCGGTAGCTGCAGATGAAGCTGAAAAATGTAAATCTGCCAAAGAGGTGATAAAGTCATTGACTACTCAGTTGAAGGAAATTGTGCAAAAACTGCCAGAAGGAAATATTGCCAGCTCCAGTCCAGACTTCCATAATGGAACCAGGATGCAAAACCATTCCGTAGATGAGAATCATATAATGAATGTAGTCACTCCTGAAGCTGGGTCCGATAGCAATGCAGCAAATCGCATGTTGCCTAATGGTGCCAAAACACCTGGCGGAAAATCAGAATGGGTGGTGCAAGATGAACCTGGCGTATACATAAGTTTGATTACCTTGCCAAGTGGTGTTAATGAACTTAAACGTGTTCGCTTCAGTCGGAGACATTTCACAGAAGACCAAGCTGAGAAGTGGTGGGCTGAAAATGGAACCAAAGTATTGGAGCGGAACAATATAGTTGCTTCCTAG 3045 0.4194 MADPQRTGVGERDIEQAITYLKKGAYLLKYGRRGKPKFCPFRLSNDESLLIWYSGKEEKQLKLSTVSKIIPGQRTSTFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEIWFVGLKALVTRGNTRKSRHDTRSDMLSDSSQSHSRRTTPSASPLDPGDIEGVSFETYSQKRLGRAFSEIISFTATGKASSKDESIANSSLSSGSVENSNNRNSAAEAFRVSLSSAVSSSSQSSYHEDFDGLGDIFIWGEGVGDGILGGGMHRVGTLPSSIMDAFLPKALESKVVLDVHSIACGYKHAVLVTKQGEIFSWGEESGGRLGHGVETDVSHPKLIDTLSGMNVELVACGEYHTCAVTFSGDLYTWGDGTHNCGLLGHGTEATHWIPKRVSGNMEGVHVSYVSCGPWHTAIVTSAGQLFTIGDGSFGALGHGDYSSTNIPREVETLRGLKTTKVSCGVWHTAAVVEVINESVESSGGSPIGKLFTWGDGDKGRLGHGNKEPRLIPERVTALDNENICRVACGHNLTIALTTSGHVYTMGSTAYGQLGNPAADGNVPKRVGGKISYSFIEDIACGSYHVAVLTSKTEVYTWGKGSNGQLGHGDIDHRNTPTLVANLKDKQVKSVACGSNFTAVVCLHKSVSGADHSVCSGCHNPFGFRRKRHNCYNCGLVFCNACSSRKSTKASLSPNNNKPYRVCDDCYSKLNKPTESISLGQTPSSKSGSTNDLKAPKLQGTLSRLSSFGSILQAESRQAKPSESNDSHIFPALNGKLQLGSFSPSKASNSLAGVSSRKPLSNSVPSTRLASQATSPVSTKSSPCQSHEDTQDESKQRNEILNQEVTSLRAQVEDLTRKSKILETELERTSKQLKEVTAVAADEAEKCKSAKEVIKSLTTQLKEIVQKLPEGNIASSSPDFHNGTRMQNHSVDENHIMNVVTPEAGSDSNAANRMLPNGAKTPGGKSEWVVQDEPGVYISLITLPSGVNELKRVRFSRRHFTEDQAEKWWAENGTKVLERNNIVAS 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01033 1014 SMART fyve_4 632 701 IPR000306 GO:0046872
Bach10g01033 1014 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 292 302 IPR000408 -
Bach10g01033 1014 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 413 464 IPR000408 -
Bach10g01033 1014 FunFam PH, RCC1 and FYVE domains-containing protein 1 215 466 - -
Bach10g01033 1014 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 358 412 IPR000408 -
Bach10g01033 1014 PRINTS Chromosome condensation regulator RCC1 signature 308 324 IPR000408 -
Bach10g01033 1014 PRINTS Chromosome condensation regulator RCC1 signature 577 598 IPR000408 -
Bach10g01033 1014 PRINTS Chromosome condensation regulator RCC1 signature 399 415 IPR000408 -
Bach10g01033 1014 PRINTS Chromosome condensation regulator RCC1 signature 358 374 IPR000408 -
Bach10g01033 1014 PRINTS Chromosome condensation regulator RCC1 signature 415 429 IPR000408 -
Bach10g01033 1014 PRINTS Chromosome condensation regulator RCC1 signature 519 537 IPR000408 -
Bach10g01033 1014 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 530 581 IPR000408 -
Bach10g01033 1014 Coils Coil 876 896 - -
Bach10g01033 1014 Gene3D - 13 131 IPR011993 -
Bach10g01033 1014 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 582 633 IPR000408 -
Bach10g01033 1014 CDD PH_PLC_plant-like 12 122 - -
Bach10g01033 1014 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 57 891 - -
Bach10g01033 1014 Pfam Transcription factor BRX N-terminal domain 871 898 IPR027988 -
Bach10g01033 1014 CDD FYVE_like_SF 644 696 - -
Bach10g01033 1014 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 638 700 IPR017455 -
Bach10g01033 1014 MobiDBLite consensus disorder prediction 139 153 - -
Bach10g01033 1014 SUPERFAMILY PH domain-like 13 121 - -
Bach10g01033 1014 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 306 357 IPR000408 -
Bach10g01033 1014 MobiDBLite consensus disorder prediction 773 834 - -
Bach10g01033 1014 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 244 305 IPR000408 -
Bach10g01033 1014 SUPERFAMILY FYVE/PHD zinc finger 637 707 IPR011011 -
Bach10g01033 1014 Pfam Regulator of chromosome condensation (RCC1) repeat 357 408 IPR000408 -
Bach10g01033 1014 Pfam Regulator of chromosome condensation (RCC1) repeat 306 354 IPR000408 -
Bach10g01033 1014 Pfam Regulator of chromosome condensation (RCC1) repeat 583 630 IPR000408 -
Bach10g01033 1014 Pfam Regulator of chromosome condensation (RCC1) repeat 529 578 IPR000408 -
Bach10g01033 1014 Pfam Regulator of chromosome condensation (RCC1) repeat 413 461 IPR000408 -
Bach10g01033 1014 Pfam Regulator of chromosome condensation (RCC1) repeat 478 526 IPR000408 -
Bach10g01033 1014 SUPERFAMILY RCC1/BLIP-II 243 634 IPR009091 -
Bach10g01033 1014 MobiDBLite consensus disorder prediction 773 814 - -
Bach10g01033 1014 Coils Coil 813 868 - -
Bach10g01033 1014 ProSiteProfiles BRX domain profile. 955 1010 IPR013591 -
Bach10g01033 1014 Pfam FYVE zinc finger 639 700 IPR000306 GO:0046872
Bach10g01033 1014 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 478 529 IPR000408 -
Bach10g01033 1014 Pfam Pleckstrin homology domain 15 121 IPR001849 -
Bach10g01033 1014 Gene3D - 182 369 IPR009091 -
Bach10g01033 1014 Gene3D - 370 472 IPR009091 -
Bach10g01033 1014 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 647 706 IPR013083 -
Bach10g01033 1014 Pfam Transcription factor regulating root and shoot growth via Pin3 954 1007 IPR013591 -
Bach10g01033 1014 Gene3D - 473 646 IPR009091 -
Bach10g01033 1014 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 451 461 IPR000408 -
Bach10g01033 1014 MobiDBLite consensus disorder prediction 125 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01033 Bach-Chr10 7613370 7620111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01033 953 1011 Major Intrinsic Protein MIP AT1G31880 50.847 2.06e-14 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g01033 - - qsa:O6P43_033034 1466.44