Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01029 ATGTCTAGCAGAAGATCATCCCGTTCGAGACAATCCGGTAATGTTTCCAACACTGAGATCACTGATGATCAGATCAACGATCTCGTCTCCAAGTTACAGCAACTCATCCCTGAGCTTCGCACCAGGCGCTCCGACAAGGTTTCATCAGCAAAGGTGTTGCAGGAGACTTGCAACTACATCAAGAACTTGCACAGAGAAGTGGATGACCTAAGTGACCGATTATCTCAGCTTTTGGCCAACACAGACTCTGATAGTGCTCAAGCAGCCATTATTAGGAGCTTACTCATGTAA 291 0.4639 MSSRRSSRSRQSGNVSNTEITDDQINDLVSKLQQLIPELRTRRSDKVSSAKVLQETCNYIKNLHREVDDLSDRLSQLLANTDSDSAQAAIIRSLLM 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01029 96 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 9 63 IPR011598 GO:0046983
Bach10g01029 96 Pfam Helix-loop-helix DNA-binding domain 23 63 IPR011598 GO:0046983
Bach10g01029 96 MobiDBLite consensus disorder prediction 1 20 - -
Bach10g01029 96 CDD bHLH_AtPRE_like 20 80 - -
Bach10g01029 96 PANTHER TRANSCRIPTION FACTOR PRE 1 96 IPR044293 GO:0006355|GO:0040008|GO:0046983
Bach10g01029 96 FunFam Transcription factor ILI6 8 92 - -
Bach10g01029 96 Gene3D - 22 92 IPR036638 GO:0046983
Bach10g01029 96 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 23 82 IPR036638 GO:0046983
Bach10g01029 96 Coils Coil 60 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01029 Bach-Chr10 7563096 7563707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01029 20 95 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G74500 77.922 2.46e-36 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach10g01029 HLH 1.5e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g01029 - - gmx:100816720 148.288