Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01027 CTTTCCAAAGCTGATAAGGTATATAAGCCACACTTGAGAACAATTTGTCCATCATCTTCCCTTCCAAGGAATACTAGTTTACTCTTAATTTAGCAGAGGATGTTATAAAGGAGTAGACCTTAGTCTTTGCCATTCCTTCTTCCAAAGAAACTTTCTTCAATCTTTGAGCATCAGGAAGTCTTCTCTTCTATTTAAGCATGAGAATCAGAAAATCATAGAACTCTTGAAAGTTTCAAATAGACCAAGAATACAAGCAATGAAATATGGCTTTCTTCCAAGCAAATTTCATGCTCCAAACCCATCACCAAGAGGACCATCAACCTCCACCTTCTCTCAATTCAATTCTACCTTCCTGTGCTCCTCAAAATTATCACGGGGGAGCATCCTTTCTAGGCAAGAGATCTATGTCATTTTCAGGCATTGAACTAGGTGAAGAAGCTAATGCTGAGGAAGATTTGTCAGATGATGGGTCACAAGCAGGGGAAAAGAAGAGGAGGCTTAACATGGAACAGGTCAAGACCCTTGAGAAGAGCTTTGAGTTGGGAAATAAGCTTGAACCAGAGAGGAAAATGCAGCTAGCAAGGGCTCTTGGTCTGCAGCCTAGACAGATTGCCATATGGTTCCAGAACAGGAGGGCTAGGTGGAAGACCAAGCAGTTGGAGAAAGACTATGATCTTCTGAAAAGACAGTATGAAGCTATCAAGGCAGATAATGATTCTCTTCAAGCTCAGAACCAAAAACTTCAGGCAGAGATATTAGCAATAAAAAACAGAGAACCAACTGAATCTATCAACCTCAACAAAGAAACAGAGGGATCCTGCAGTAATAGAAGTGAGAACAGTTCAGATATTAAGTTGGATATCTCGAGGACACCAGCTATTGATAGCCCTCTTTCCACTCATCAAACCAGCAGAAACCTCTTTCCAACTTCTGCTGCTAGGCCCACAGGAGTTGCACAGCTTTTCCAAACTTCTTCAAGGACAGACCTCCAATGCCAAAAGCTTGATCAGATGGTCAAAGAAGAAAGCTTAACCAACATGTTTTGTGGTATTGATGATCAATCTGGGTTCTGGCCATGGTTGGAGCAGCAACATTTCAATTGAAGCAAAGGGAGAGAGTTTCAAGTTGGAAAGTAGTTTCTTCCTGGTGAAACTCAATGCAAAGGGTGTCAATGAATTACCATACTTTCATGAGTTATTGAATTAAAAGTTTAAAACCCATGTTTTTGGTACTTGATGTATAAAATAGGATATATCAAGTAGAAATTTTCAGGTGGGGCTTGAAAATTTT 1290 0.4016 MAFFQANFMLQTHHQEDHQPPPSLNSILPSCAPQNYHGGASFLGKRSMSFSGIELGEEANAEEDLSDDGSQAGEKKRRLNMEQVKTLEKSFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQYEAIKADNDSLQAQNQKLQAEILAIKNREPTESINLNKETEGSCSNRSENSSDIKLDISRTPAIDSPLSTHQTSRNLFPTSAARPTGVAQLFQTSSRTDLQCQKLDQMVKEESLTNMFCGIDDQSGFWPWLEQQHFN 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01027 279 ProSitePatterns 'Homeobox' domain signature. 105 128 IPR017970 GO:0000981|GO:0006355
Bach10g01027 279 MobiDBLite consensus disorder prediction 178 197 - -
Bach10g01027 279 MobiDBLite consensus disorder prediction 175 197 - -
Bach10g01027 279 Pfam Homeodomain 75 128 IPR001356 GO:0003677
Bach10g01027 279 Coils Coil 122 170 - -
Bach10g01027 279 CDD homeodomain 75 131 IPR001356 GO:0003677
Bach10g01027 279 SUPERFAMILY Homeodomain-like 68 132 IPR009057 -
Bach10g01027 279 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 47 210 IPR045224 GO:0003700
Bach10g01027 279 SMART HOX_1 73 134 IPR001356 GO:0003677
Bach10g01027 279 Gene3D - 67 136 - -
Bach10g01027 279 PRINTS Lambda-repressor HTH signature 110 126 IPR000047 GO:0003677
Bach10g01027 279 PRINTS Lambda-repressor HTH signature 101 110 IPR000047 GO:0003677
Bach10g01027 279 Pfam Homeobox associated leucine zipper 130 170 IPR003106 GO:0006355|GO:0043565
Bach10g01027 279 ProSiteProfiles 'Homeobox' domain profile. 70 130 IPR001356 GO:0003677
Bach10g01027 279 MobiDBLite consensus disorder prediction 58 78 - -
Bach10g01027 279 FunFam Homeobox-leucine zipper protein ATHB-13 67 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01027 Bach-Chr10 7541054 7543134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01027 1 279 Homeobox Transcription Factor Family AT1G69780 63.729 9.85e-121 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bach10g01027 Homeodomain 1.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g01027 K09338 - gmx:100801479 504.212