Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01020 ATGCAAGTATTCTCTCTGTCAGTAAGTGAAATGGGAAGCATTATTAGCCTTGGTGCAAGGGATTCACTTGAGTTTTTCCATGATCCTCTTAAAGGGAAAAGTGATGAAGGTCAAGTCCGAAAAGTTTTGAAGGTGGAACCTCTTCCAGATGGTTCTGGTCACTTCTTTAACCTCAGTGTTCAGAACAAGCTTGTAAACGTGGATGAAAGCATCTATGTCCCAGTTACAAAATCAGAGTTAGCAGTATTCAACTCAATTTTCAATTTTATCATGCCCTACCTTCTAGGTTGGCATGCCTTTGCAAATTCTATAGAGCCAAAATATCACGGCCAAACGAATAATGCCAACCCAAGATATGGAAGAGACTATGAATGGAGCAGATAGGGAGATGCTACT 396 0.404 MQVFSLSVSEMGSIISLGARDSLEFFHDPLKGKSDEGQVRKVLKVEPLPDGSGHFFNLSVQNKLVNVDESIYVPVTKSELAVFNSIFNFIMPYLLGWHAFANSIEPKYHGQTNNANPRYGRDYEWSR 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01020 127 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL 2 127 IPR013742 GO:0003697|GO:0006355|GO:0006952
Bach10g01020 127 Pfam Whirly transcription factor 2 85 IPR013742 GO:0003697|GO:0006355|GO:0006952
Bach10g01020 127 Gene3D Transcriptional Coactivator Pc4; Chain A 1 115 IPR009044 GO:0003677|GO:0006355
Bach10g01020 127 SUPERFAMILY ssDNA-binding transcriptional regulator domain 2 127 IPR009044 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01020 Bach-Chr10 7360107 7361636 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01020 2 127 Whirly Transcription Factor Family AT1G14410 74.603 1.86e-70 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Whirly Bach10g01020 Whirly 1.5e-33 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g01020 K26559 - pcin:129310571 218.779