Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01009 ATGGAATCGCAGTTGGGTTTAATAGAGCAATCATTCAGTAACTGGTACTCGAACTATGTCTACGAGGAACTCGACGAATTGCCTTATAATTTTAGTATCACCGACCCTTCCATTTCTGGCCACCCAATTGTATTTGCAAGCCGTGGGTTCCTAAAAATGTCGGGGTATTCTAAAGATGAGGTGATTGGTAATAATGGGAAGATTTTTCAAGGACCCGGCACTTGTAGAAGATCGATAATGGAAATTCGAGAGGCAATAAGGGAAGAGAAGACCATTCAGATAAATTTGTTGAATTATCGTAAAGATGGGACACCTTTTTGGATGCTATTTCATATGAGCCCTGTCTTTAGCAAGGATGATGGGAGGGTGATCCACTTCGTCGCAGTTCAGGTACCCATATGGAAAAAACGAAGGAGGTCTGGTTGTGGATATGGAAGAATTGGAGTTAGTTTGTCTGAGGATGGCTCTCAGGTGCAGGATTTTGTTTTTGGGTCCTGTAGAAAGGAAGTCTGCTCGGATTCTTTGCTGGAAATGGGTCGTGTTTTGCCCCTGGAACAAGTTTTGGAACATGATATTAGAGAATCAGTGTCTGAAGAGCCATGCGAGGCAAGTGATGATGATAAGATAAAATCTATGACTGCCATGGACGACATCTTTTCTTTGCTAACTCACTACAGCGAGTTAACTGGCAAATTGGTGTGTAGAAAAAGATGTAGCATCCCTGACGTGGGTCTTCTTAGCTCATCCTTGATTATTTCTCTTGGTAGAATCAAACAAAGCTTTGTATTAACTAATCCGCACTTACCTGACATGCCCGTTGTGTACGCCAGTGATGCCTTCTTGAAATTGACAGGTTATGCAAGGGACGAAGTATTGGGGCGCAATTGTAGATTTTTAAGTGGAGTGAGTACTAATACTTCAACTTTATGTCTGATAAGGGAAAGCATTAAAACTGAACAACCCTGCACAGTACGTATTTTGAATTACAGGAAGGATAAAACCTCGTTTTGGAATCTTCTCCACATATCACCTGTTCGTGATGCTCATGGCAAGATAGCATACTTTGTAGGTGTTCAAATGGAAGAAGGCTGTAATGATAAGACACAGGAGAGACGGGGTTTGAGCCCTGAGACGAGGCTGCTAAGCGTGGTTGGTTCAGTCAAGGTTGCTGTGAGGAGTTCATCAATGAGTGCTGGATCTTCAAAGTCATAG 1212 0.4241 MESQLGLIEQSFSNWYSNYVYEELDELPYNFSITDPSISGHPIVFASRGFLKMSGYSKDEVIGNNGKIFQGPGTCRRSIMEIREAIREEKTIQINLLNYRKDGTPFWMLFHMSPVFSKDDGRVIHFVAVQVPIWKKRRRSGCGYGRIGVSLSEDGSQVQDFVFGSCRKEVCSDSLLEMGRVLPLEQVLEHDIRESVSEEPCEASDDDKIKSMTAMDDIFSLLTHYSELTGKLVCRKRCSIPDVGLLSSSLIISLGRIKQSFVLTNPHLPDMPVVYASDAFLKLTGYARDEVLGRNCRFLSGVSTNTSTLCLIRESIKTEQPCTVRILNYRKDKTSFWNLLHISPVRDAHGKIAYFVGVQMEEGCNDKTQERRGLSPETRLLSVVGSVKVAVRSSSMSAGSSKS 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01009 403 SUPERFAMILY PYP-like sensor domain (PAS domain) 264 359 IPR035965 -
Bach10g01009 403 ProSiteProfiles PAC domain profile. 320 374 IPR000700 -
Bach10g01009 403 ProSiteProfiles PAS repeat profile. 273 295 IPR000014 -
Bach10g01009 403 CDD PAS 269 361 IPR000014 -
Bach10g01009 403 CDD PAS 43 133 IPR000014 -
Bach10g01009 403 SMART pac_2 93 136 IPR001610 -
Bach10g01009 403 SMART pac_2 323 362 IPR001610 -
Bach10g01009 403 NCBIfam PAS domain S-box protein 43 128 IPR000014 -
Bach10g01009 403 NCBIfam PAS domain S-box protein 273 358 IPR000014 -
Bach10g01009 403 PANTHER PROTEIN TWIN LOV 1 4 394 - -
Bach10g01009 403 ProSiteProfiles PAS repeat profile. 39 65 IPR000014 -
Bach10g01009 403 Pfam PAS domain 41 131 IPR000014 -
Bach10g01009 403 Pfam PAS domain 260 358 IPR000014 -
Bach10g01009 403 FunFam Protein TWIN LOV 1 isoform D 30 224 - -
Bach10g01009 403 Gene3D PAS domain 260 401 - -
Bach10g01009 403 Gene3D PAS domain 30 144 - -
Bach10g01009 403 FunFam protein TWIN LOV 1 260 398 - -
Bach10g01009 403 SUPERFAMILY PYP-like sensor domain (PAS domain) 31 130 IPR035965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01009 Bach-Chr10 7283545 7287096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01009 24 392 AGC Kinase Gene Family AT5G58140 31.415 2.64e-59 205