Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00988 GCTCTCTCTGTTTCATCTGCGTACAACCAAGCGCTTGTAAGATCACCAACGATTCGAAAAAGAAGGCGGTTGCGACTGATCGGAGCCGGCATAAATTTCCGTTCCGTTTTGGAGGATGAACGGATGAGATAGGATTTCGTTGTCGTCATCTTCTACGTCAAGATCGAGGAACAACATGAGCCAACAACGGATTCCTTCGTCTCGAACGGTTCGACTTGGCCGAGTCCAGCCCCAGGCTCCCGGCCACCGCACCATTTTCGCAAATGATCGTGAGGCCAGTCAAATGATCCGATTCAGGGGGAATTCAATATCAACTACAAAATACAACATTTTCACCTTCTTGCCAAAAGGGCTGTTTGAGCAGTTTAGGCGGGTGGCTAATCTCTACTTCCTTACAATCTCAATTCTGTCAACTACACCCATCAGTCCTGTGTCACCAATAACAAATGTGCTTCCTCTAAGTCTGGTGCTTCTTGTCTCTCTTATTAAGGAAGCTTTTGAGGACTGGAAACGTTTTCAAAATGACATGGCCATAAACAATAATACGGTAGATGTGTTGCAAGATCAAAAGTGGGAATCTCTACCCTGGAAAAAGTTGCAGGTTGGAGACATTGTCAAGATTAAGCAGGATGAATTCTTTCCTGCAGATCTGCTTTTTCTGGCTGGTACAAATCCAGACGGTGTCTGCTATATTGAGACTGCTAATTTGGATGGGGAAACAAATTTGAAGATTAGAAAAGCTTTGGAAAAGACCTGGGATTACCTCACACCAGAAAAGGCATCTGAGTTTAAAGGTGAAATTCAGTGTGAACAACCAAACAATTCATTGTACACTTTCACTGGGAATCTTATAATTCAAAACCAAACACTGCCTCTCAGCCCAAACCAAATTTTGTTGCGAGGATGCAGTCTCAGGAATACAGAGTATGTTGTTGCGGTTGTTATTTTTACAGGACATGAAACAAAGGTGATGATGAATACCATGAATGTTCCTTCCAAAAGAAGTACATTGGAAAGGAAGCTTGATAAGCTCATACTCACTCTATTTGCGACTCTCTTTGTTATGTGTTTTATTGGTGCAGTAGGCAGTGGTATCTTCGTAAATGAAAAATATTTCTATTTACGACTTGGAGAAGATAAGGATGGGCAATTTAACCCGAACAACAGAATGCTGGTCATCACTCTGACTATGTTTACCCTTATTACTCTATACTCGACAATCATCCCCATTTCACTTTATGTGTCAATAGAGATGGTCAAATTTATTCAGTCAACTCAATTTATCAACAAAGATCTGAACATGTACCATAGTGAAACCAATACCCCGGCATTAGCCAGAACTTCCAACCTGAATGAAGAACTGGGGCAGGTCGAATACATCTTCTCTGACAAAACTGGAACTCTAACAAGAAACTTAATGGAGTTCTTCAAGTGTTCAATTGGTGGAGAGGTATATGGAAATGGTGTCACTGAAATTGAGAGGGGAATAGCAGAGCGTAATGGCATGAAAATTGAGGAAAATACGTCAACCAATGGAGTGCTAGAAAAGGGTTTCAATTTTGACGATGCTAGGATTATGCGAGGAGCTTGGAGGAATGAACCCAATCCTGACCTGTGCAAGGAATTCTTCAGATGCCTTGCTATATGCCATACTGTACTTCCTGAGGGTGATGAGTCCCCTGAAAAGATCAGATATCAAGCTGCATCACCTGATGAGGCTGCTTTGGTTGTTGCTGCAAAGAACTTTGGTTTCTTCTTCTACAGACGTACACCTACCATGATATATGTTCGAGAATCTCATGTTGAGAAGATTGGTAGCATTCAAGATGAATCTTATGAGATCTTGAATGTGCTTGAGTTCAACAGTACAAGGAAACGTCAGTCTGTTGTATGTCGTTATCCAAATGGAAGGCTTGTATTGTACTGCAAGGGTGCTGATACTGTAATATATGAGAGATTAGCTGACGGTAATAATGATATAAAAAATGTGACTAGGAGATACTTGGAACAATTTGGATCTGCTGGGTTACGTACACTATGCCTGGCCTACAAAGATTTGCATCCTGATGTGTATGAAAGCTGGAATGAAAAGTTTATCCAGGCCAAATCTTCTCTACGTGATCGTGAAAAGAAGTTAGATGAGGTGGCCGAACTTATAGAAAATGATCTGATTTTGATTGGTAGCACTGCCATAGAAGATAAGCTTCAAGAGGGGGTACCAGCCTGTATTGAGACTCTTTCTAGAGCTGGGATCAAAATTTGGGTGCTTACAGGGGACAAGATTGAAACAGCAATAAATATAGCATATGCCTGCAATTTAATAAACAATGAGATGAAGCAATTTATCATCAGCTCAGAAATTGATGCCATTAGAGAGGTTGAGGAGAGGGGTGACCAAGTGGAAATTGCTCGTTTTATTAAAGAAGAAGTAGGAAAAGATCTGAAGAGGTTCCTTGAGGAAGCGCAGAATTATCTTAGCTCTCAATCAGGACCAAAATTAGCGCTTGTAATTGATGGAAAGTGTCTAATGTATGCATTAGATCCAAGTTTGAGAGTGACACTGCTGAATTTGAGTTTGAATTGTCATGCTGTTGTATGCTGCCGGGTTTCTCCTTTACAAAAGGCACAGGTCACAAGTCTGGTTAAGAAAGGTGCCAAAAAAATAACACTTAGTATTGGTGATGGAGCCAATGATGTTAGTATGATTCAAGCTGCTCATGTTGGTATTGGCATAAGTGGGCTGGAAGGGATGCAAGCAGTGATGGCTAGTGATTTTGCCATTGCTCAGTTTCGTTATCTTGCAGATTTACTTCTTGTTCATGGACGGTGGTCATATCTTCGAATATGCAAGGTGGTTACATACTTCTTTTACAAGAATCTCACATTCACTCTTACTCAGTTTTGGTTTACTTTTCAAACTGGATTTTCTGGTCAGAGGTTCTATGATGATTGGTTTCAATCATTGTATAATGTTATCTTTACGGCACTGCCTGTGATTATGGTTGGACTTTTTGACAAGGATGTCAGTGCATCTCTTTCCAAGAAATACCCTGAACTATACAGGGAGGGGATAAGAGATATGTTTTTTAATTGGAGAGTGGTGGCTATATGGGCTTTTTTTTCTGTCTACCAATCTTTAGTATTCTTCTATTTTGTGACCAAGTCAAGTTTCAATGCTAAAAACTCAGAAGGTAAAACCTTCGGACTCTGGGATGTTAGCACGATGGCGTTCACGTGTATTGTAATAGCTGTCAACCTGCGACTTCTTATGATATGTAACTCGATTACAAGGTGGCATTATATTAGTGTTGGAGGAAGTATATTGGCATGGTTTTTATTTGTTTTCATATATTCAGGGATCAGCACTCCATATGATCGACAGGAGAATATTTATTTTGTCATATATGTCTTGATGAGTACAATCTATTTCTATGTCACACTTCTTCTTGTCCCCGTTGTTGCACTTTTTGGTGACTTCATTTACCAAGGGGTTCAAAGATGGTTCCTCCCCTATGATTATCAGATTGTTCAGGAAATGCATAGACATGAGCCTGATAGCACCAGTAGGGCACAACTGCTGGAGATAGGGAACCAGCTCACGCCATCTGAGGCAAGGAGCTATGCCATATCTCAACTGCCGCGTGAGATTTCAAAGCACACTGGATTTGCCTTTGATTCACCCGGGTACGAGTCCTTTTTCGCTGCACAACTAGGAATATATGCCCCACAAAAGGCTTGGGATGTTGCAAAACGAGCTAGCGCGAAGTCACGGCCCAAGAACCAGAAGAAATAATTTGGTTTAGGATGACTGTACATTCACTTTCTTTTTAGTTTTGGTGCCCCATTTTTGAGAACCAGCCTTAGGAAGTCTGTAGAATTAGGATGTGCTACACCCCACCCAATGCAGCTCATTTTCACTTGGGAGATATCTCTTCCCACCTTCATGTTGGTTTCTTCTAGGGATGATTTGCAGTTTGTCAGGATTGACT 3989 0.4104 MSQQRIPSSRTVRLGRVQPQAPGHRTIFANDREASQMIRFRGNSISTTKYNIFTFLPKGLFEQFRRVANLYFLTISILSTTPISPVSPITNVLPLSLVLLVSLIKEAFEDWKRFQNDMAINNNTVDVLQDQKWESLPWKKLQVGDIVKIKQDEFFPADLLFLAGTNPDGVCYIETANLDGETNLKIRKALEKTWDYLTPEKASEFKGEIQCEQPNNSLYTFTGNLIIQNQTLPLSPNQILLRGCSLRNTEYVVAVVIFTGHETKVMMNTMNVPSKRSTLERKLDKLILTLFATLFVMCFIGAVGSGIFVNEKYFYLRLGEDKDGQFNPNNRMLVITLTMFTLITLYSTIIPISLYVSIEMVKFIQSTQFINKDLNMYHSETNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEVYGNGVTEIERGIAERNGMKIEENTSTNGVLEKGFNFDDARIMRGAWRNEPNPDLCKEFFRCLAICHTVLPEGDESPEKIRYQAASPDEAALVVAAKNFGFFFYRRTPTMIYVRESHVEKIGSIQDESYEILNVLEFNSTRKRQSVVCRYPNGRLVLYCKGADTVIYERLADGNNDIKNVTRRYLEQFGSAGLRTLCLAYKDLHPDVYESWNEKFIQAKSSLRDREKKLDEVAELIENDLILIGSTAIEDKLQEGVPACIETLSRAGIKIWVLTGDKIETAINIAYACNLINNEMKQFIISSEIDAIREVEERGDQVEIARFIKEEVGKDLKRFLEEAQNYLSSQSGPKLALVIDGKCLMYALDPSLRVTLLNLSLNCHAVVCCRVSPLQKAQVTSLVKKGAKKITLSIGDGANDVSMIQAAHVGIGISGLEGMQAVMASDFAIAQFRYLADLLLVHGRWSYLRICKVVTYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIMVGLFDKDVSASLSKKYPELYREGIRDMFFNWRVVAIWAFFSVYQSLVFFYFVTKSSFNAKNSEGKTFGLWDVSTMAFTCIVIAVNLRLLMICNSITRWHYISVGGSILAWFLFVFIYSGISTPYDRQENIYFVIYVLMSTIYFYVTLLLVPVVALFGDFIYQGVQRWFLPYDYQIVQEMHRHEPDSTSRAQLLEIGNQLTPSEARSYAISQLPREISKHTGFAFDSPGYESFFAAQLGIYAPQKAWDVAKRASAKSRPKNQKK 1205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00988 1205 FunFam Phospholipid-transporting ATPase IC 400 412 - -
Bach10g00988 1205 ProSitePatterns E1-E2 ATPases phosphorylation site. 405 411 IPR018303 -
Bach10g00988 1205 Pfam Phospholipid-translocating ATPase N-terminal 27 91 IPR032631 -
Bach10g00988 1205 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 409 681 IPR023299 GO:0000166
Bach10g00988 1205 Gene3D - 667 874 IPR023214 -
Bach10g00988 1205 NCBIfam HAD-IC family P-type ATPase 807 913 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bach10g00988 1205 NCBIfam phospholipid-translocating P-type ATPase 40 1120 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Bach10g00988 1205 SUPERFAMILY Calcium ATPase, transmembrane domain M 39 1112 IPR023298 -
Bach10g00988 1205 Gene3D - 105 270 - -
Bach10g00988 1205 CDD P-type_ATPase_APLT_Dnf-like 42 994 - -
Bach10g00988 1205 FunFam Phospholipid-transporting ATPase 101 270 - -
Bach10g00988 1205 Pfam E1-E2 ATPase 121 360 - -
Bach10g00988 1205 FunFam Phospholipid-transporting ATPase 511 666 - -
Bach10g00988 1205 SFLD p-type atpase 385 885 IPR044492 -
Bach10g00988 1205 FunFam Phospholipid-transporting ATPase 667 874 - -
Bach10g00988 1205 PRINTS P-type cation-transporting ATPase superfamily signature 403 417 - -
Bach10g00988 1205 PRINTS P-type cation-transporting ATPase superfamily signature 834 853 - -
Bach10g00988 1205 Pfam Phospholipid-translocating P-type ATPase C-terminal 862 1112 IPR032630 -
Bach10g00988 1205 Gene3D - 531 666 IPR023299 GO:0000166
Bach10g00988 1205 SUPERFAMILY HAD-like 391 876 IPR036412 -
Bach10g00988 1205 SUPERFAMILY Calcium ATPase, transduction domain A 122 266 IPR008250 -
Bach10g00988 1205 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 27 1161 - -
Bach10g00988 1205 Pfam Cation transport ATPase (P-type) 500 594 - -
Bach10g00988 1205 SFLD C1.7: P-type atpase like 385 885 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00988 Bach-Chr10 7092507 7105788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00988 2 1205 Primary Pumps ATPases AT1G59820 80.249 0.0 2060
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00988 K14802 - gmx:100815547 2158.64