Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00977 ATGTCTTTGATGCTTCAGTCATGGCTAATTTTGAGCCTTGTTTTTGTTTCTGTTATACCAATCTATCATTGCCAGCTTGGTTCTCCTCAGAATATAGAAACTTCCTATCCAACTGAAGCTGAAGCCGCAGAACCTGCACCTGAATCTCCAATACAACCACCGCCAGCTTCACCGGAGCAGCAAGGCCCGCTGGCATCAAGAAGTTCTTCATCAAACCGTAAAATAGCTAAGGCAGTGGCAGGAACTGCAGCTGGCACTTTTGTTGTTTCTGGTTTACTCTTCTTTTTAATTCATAGGTGTTTAAGAGCAAGGCGCAGAAGGGAGATAGCAAATTCTAGTCCAGCAGGACATAGGCGTGTTGTGCCTCAGGTAGATGATCAGTTTGAGAGAATTGAAGGGAATCTGAGGGGATTTGTTTTTGATGAGAATGGTTTGGATGTAATATATTGGAGAAAGCTTGAAGGGAAGAACTCTGAGAAGGGTCTTCAAAAAGAGGACCTGAATAGAGCCAGAAAGAGAGTACAAGAACCAGAAGACGAAGATGGTGATGGTGATGATATAGAGAAAGTTAATCAAAGGAAAAAATCTGAGCCTGTTCTAGAAATTCCTATGCTTCGGGGGAAATCTTCAACTTCCCACATAAGCATATTACCAGAAGAGAATGAATCAAATAGAGTTAGAAATAGAACTACTCCACCTCCTGCTTCTACATCAGCTATGGCTGCTCCAAAGGATGTTAAGAAACCAGACTCACGTGCTCAACCACCTCCTCCTCCAACTTCACCCTTCACTTCATCTGCCATTCCAAAACAGAAAACCCCTGCAGCTGCAGCACCACCACCCCCTCCGCCAATCTCAGTTAGAAAGAGTCCAGCGCCGCCGCCACCTGCTCCGCCAATGGGAGGTAGTTTGAGGTCATCATCAAAACCGCCACCTACCCCTCATGAAATGCCAGAACAGAAGAAGCCTTCAGGGGAAGGCGTGTCAGAAAGTGACGATGGTCAAGTAAAACTGAAGCCTTTGCATTGGGATAAGGTGAACACCAATCGTGATCACTCTATGGTGTGGGACAAAATGGATGGCGGTTCTTTCAGGTTTGATCAAGATCTTATGGAAGCTCTGTTTGGAACCGTTGCCACAAACCGAAGATCCCCAAAAGGAAAGAGTAACACAACTAGTCCAACCAGGGATGTTTCTGCTCCATCAGGAAAAACTTACCTTCTTGATCCGAGGAAATCACAGAACATTGCTATTGTTCTCAAATCATTGGCAGTCTCAAGACAAGAAATCCTTGATGCACTCATCAAGGGTCAAGGTCTGAATGTAGAAACTCTTGAAAAGCTCTCCAGAGTTGTCCCGACAGAAGAAGAGCAATCTCAAATTCTTGCATATAAAGGAGACTCTTCAAGTCTTGCTGCTGCTGAGACATTCCTCTATGACATCCTTAAAGCTGTTCCTTCAGCTTTCAAGCGCTTGAACGCCATGCTCTTCAGGTTGAACTATGACTCAGAAATTCTACAAATCAAGGAATCGCTACAGACCCTTGAACTGGGATGCAAAGAGCTAAGAAATAAGGGACTCTTTGTGAAGCTTCTTGAAGCAGTTCTTAAGGCTGGAAACCGTATGAATGCAGGTACTTCACGAGGTAATGCTCAAGCTTTCAGCTTGACATCTCTCAGGAAGCTCTCTAATGTCAAGAGCTCAGACGAAAAAACCACATTGCTTCACTTTGTGGTTGAAGAAGTAGTTAGGTATGAAGGAAAACGTTGTGTTCTTAACCGCAATCGCAGTCTAAATCGAAGCAGTAGCAGCAATGGAAGTAGTAATTTTGAGAACTCTGCTTCAAGTGAACAAAGAGAAAAGGAATACATAACACTAGGATTGCCAATTGTAGGAGGACTGAGTTCTGACTTCTCAAACGTGAAGAAAGCATCCCTTGTAGATTATAACAGTTTAGTTGGTTCAATCTCAGCACTCTCTACCCGGATAGCTGAAATTAGAAAAATTGTTTCACAATGCAGAAATGATGGAGGAGGAAAGTTTGTGAAGGAAATGAAACATTTTCTAGAGAATGCCGAGGAAGAATTGAAGCTTCTGAGAGATGAGCAAACAAGGGTAGTGCAGCTTGTTAGGAGAACAACAGAATATTATCAAGGAGGAGCTTCAAAAGAAATGGCAGAAAATCCAATTCAACTATTTATCTTAGTGAAGGACTTTCTGGGAATGGTTGATCAAGCCTGCATTGAGATTGCTCGTAGTTTGCAGAAGAGGAAGACAACCAAGTCAAGTTCTGCGTAG 2298 0.4321 MSLMLQSWLILSLVFVSVIPIYHCQLGSPQNIETSYPTEAEAAEPAPESPIQPPPASPEQQGPLASRSSSSNRKIAKAVAGTAAGTFVVSGLLFFLIHRCLRARRRREIANSSPAGHRRVVPQVDDQFERIEGNLRGFVFDENGLDVIYWRKLEGKNSEKGLQKEDLNRARKRVQEPEDEDGDGDDIEKVNQRKKSEPVLEIPMLRGKSSTSHISILPEENESNRVRNRTTPPPASTSAMAAPKDVKKPDSRAQPPPPPTSPFTSSAIPKQKTPAAAAPPPPPPISVRKSPAPPPPAPPMGGSLRSSSKPPPTPHEMPEQKKPSGEGVSESDDGQVKLKPLHWDKVNTNRDHSMVWDKMDGGSFRFDQDLMEALFGTVATNRRSPKGKSNTTSPTRDVSAPSGKTYLLDPRKSQNIAIVLKSLAVSRQEILDALIKGQGLNVETLEKLSRVVPTEEEQSQILAYKGDSSSLAAAETFLYDILKAVPSAFKRLNAMLFRLNYDSEILQIKESLQTLELGCKELRNKGLFVKLLEAVLKAGNRMNAGTSRGNAQAFSLTSLRKLSNVKSSDEKTTLLHFVVEEVVRYEGKRCVLNRNRSLNRSSSSNGSSNFENSASSEQREKEYITLGLPIVGGLSSDFSNVKKASLVDYNSLVGSISALSTRIAEIRKIVSQCRNDGGGKFVKEMKHFLENAEEELKLLRDEQTRVVQLVRRTTEYYQGGASKEMAENPIQLFILVKDFLGMVDQACIEIARSLQKRKTTKSSSA 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00977 765 SMART it6_source 328 758 IPR015425 -
Bach10g00977 765 Pfam Formin Homology 2 Domain 331 743 IPR015425 -
Bach10g00977 765 ProSiteProfiles Formin homology-2 (FH2) domain profile. 328 765 IPR015425 -
Bach10g00977 765 MobiDBLite consensus disorder prediction 382 400 - -
Bach10g00977 765 MobiDBLite consensus disorder prediction 379 405 - -
Bach10g00977 765 MobiDBLite consensus disorder prediction 597 614 - -
Bach10g00977 765 Gene3D Formin, FH2 domain 337 765 IPR042201 -
Bach10g00977 765 MobiDBLite consensus disorder prediction 37 70 - -
Bach10g00977 765 MobiDBLite consensus disorder prediction 274 301 - -
Bach10g00977 765 MobiDBLite consensus disorder prediction 161 178 - -
Bach10g00977 765 SUPERFAMILY Formin homology 2 domain (FH2 domain) 279 758 - -
Bach10g00977 765 MobiDBLite consensus disorder prediction 315 345 - -
Bach10g00977 765 Coils Coil 505 525 - -
Bach10g00977 765 MobiDBLite consensus disorder prediction 161 345 - -
Bach10g00977 765 MobiDBLite consensus disorder prediction 186 201 - -
Bach10g00977 765 PANTHER FORMIN-RELATED 38 758 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Bach10g00977 765 MobiDBLite consensus disorder prediction 597 616 - -
Bach10g00977 765 Coils Coil 682 709 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00977 Bach-Chr10 7001889 7004273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00977 8 759 FH2 protein (formin) Gene Family AT1G70140 46.442 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00977 - - gmx:100783219 771.926