Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00970 CTTATGCTGTCCATGTATTATATAAAACTAGTTTATTGTTTTTCTTAAGAGATGCAATGCATGTTCACTACCTTAGGAGATTACTATAAAAGGAAGAGTAGCCAAACAAGTAACCAAACCATTTCTTACATCGAAAATATCCGTTATCCTCTTACCTTAGAAAGATGGAAAAGGATGTCTGTGATCTTTCTTCTTCATGGGGTGGAGAAAATGGTCATTCTGTGGAGAAGAGGCTCAAATTGTTTGGCTTTGAGCTGAACCCCTGCTCTAAGAACAACAATGAGTGTGTCAAAGAATCTGTAGAAGGAGATGAAAGCATCAACTCCTCAAACTCAGTTTCATCTGGTGGAGATCAGAAAGCAACACAGGAGCAAGAGAAGAGCTCAACCTGCAGAGACCCAGATGAGAGGAAGTTCGAGTGCCAATATTGTTTCAAGGAATTTGCAAACTCACAAGCATTGGGAGGCCACCAGAATGCACACAAGAAAGAAAGAATGAAGAAGAAAAGGTTGCAGCTTCAAGCCAGAAAAGCCAGCATAAACTATTACCTGCAACCTTTCCAAAGCAACCCTGCTTTTGCTCACCATGGCTCCACTCCTTGGTTCTTTGATCCCTCTTCCTACAACTCTGAGTTCACTCTCTATGAAGAATCTCAGATTAGCTTCAACTCAAATGATCAAGAAGGCCATCTAAATGGGTTTGATCAGAAATCGAAGTGGTTTTCTGTGTCACCCCATGTCCCTCCCCAACCAGATTCATCTATGTTCACTTTTTCACATTCATATAACAGCCCTTTCATGTTCAAGCCTTTCCACTTCCCTGCTTCAAACCAGAGCCATAGTAAAGCTTTGGATCTTCAACTAGGCCTCAACTTGCAGTCAAATACAAGCAGCTCTCTTAGAAGGACGTAAATGGAAAAGGATGTCTGTGATCTTTCTTCTTCATGGGGTGGAGAAAATGGTCATTCTGTGGAGAAGAGGCTCAAATTGTTTGGCTTTGAGCTGAACCCCTGCTCTAAGAACAACAATGAGTGTGTCAAAGAATCTGTAGAAGGAGATGAAAGCATCAACTCCTCAAACTCAGTTTCATCTGGTGGAGATCAGAAAGCAACACAGGAGCAAGAGAAGAGCTCAACCTGCAGAGACCCAGATGAGAGGAAGTTCGAGTGCCAATATTGTTTCAAGGAATTTGCAAACTCACAAGCATTGGGAGGCCACCAGAATGCACACAAGAAAGAAAGAATGAAGAAGAAAAGGTTGCAGCTTCAAGCCAGAAAAGCCAGCATAAACTATTACCTGCAACCTTTCCAAAGCAACCCTGCTTTTGCTCACCATGGCTCCACTCCTTGGTTCTTTGATCCCTCTTCCTACAACTCTGAGTTCACTCTCTATGAAGAATCTCAGATTAGCTTCAACTCAAATGATCAAGAAGGCCATCTAAATGGGTTTGATCAGAAATCGAAGTGGTTTTCTGTGTCACCCCATGTCCCTCCCCAACCAGATTCATCTATGTTCACTTTTTCACATTCATATAACAGCCCTTTCATGTTCAAGCCTTTCCACTTCCCTGCTTCAAACCAGAGCCATAGTAAAGCTTTGGATCTTCAACTAGGCCTCAACTTGCAGTCAAATACAAGCAGCTCTCTTAGAAGGACGTAAATTTAGTTCAGGATATATAGTTTTATAGTAATATATACTCATGTTCTTTTTCAGTGATTCTGGAAAAAGTGCTATTACAAAGAAGAAAAACAGAAGAATTCACAATTCATTATAACTGGTTGGCCCAAAG 1788 0.4128 MEKDVCDLSSSWGGENGHSVEKRLKLFGFELNPCSKNNNECVKESVEGDESINSSNSVSSGGDQKATQEQEKSSTCRDPDERKFECQYCFKEFANSQALGGHQNAHKKERMKKKRLQLQARKASINYYLQPFQSNPAFAHHGSTPWFFDPSSYNSEFTLYEESQISFNSNDQEGHLNGFDQKSKWFSVSPHVPPQPDSSMFTFSHSYNSPFMFKPFHFPASNQSHSKALDLQLGLNLQSNTSSSLRRT 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00970 248 PANTHER ZINC FINGER PROTEIN 5 19 238 IPR044299 GO:0010090
Bach10g00970 248 ProSiteProfiles Zinc finger C2H2 type domain profile. 84 111 IPR013087 -
Bach10g00970 248 ProSitePatterns Zinc finger C2H2 type domain signature. 86 106 IPR013087 -
Bach10g00970 248 MobiDBLite consensus disorder prediction 48 69 - -
Bach10g00970 248 Gene3D Classic Zinc Finger 59 133 - -
Bach10g00970 248 FunFam zinc finger protein 5 54 137 - -
Bach10g00970 248 MobiDBLite consensus disorder prediction 45 78 - -
Bach10g00970 248 SUPERFAMILY beta-beta-alpha zinc fingers 80 111 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00970 Bach-Chr10 6952950 6953990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00970 82 192 C2H2 Transcription Factor Family AT1G10480 49.600 3.80e-18 78.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach10g00970 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00970 - - qsa:O6P43_033118 351.673