Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00969 TTTGGTCTCGGCAAGGAGGAGAGTTCTAGGGTTTTTTCCAGAGTGTTACTGACTAATTTGGAAAATGTCGGGGAGTCGATCGAAATCGGAGAAGCCTGGTGCTGCGAAGCAGCTCCGGCGGGATCCTTATGAGGTTCTCGGTGTCTCGCGCAACTCAACGGATCAGGAAATCAAAAGCGCTTACAGGAAAATGGCGCTCAAATATCATCCTGACAAGAATGCTAATGATCCTCAAGCAGTTGATATGTTTAAAGAAGTCACCTTTTCATACAATATCTTGTCAGATCCTGACAAAAGGAGTCAGTATGACTCTGCTGGTATTGAGGCTGTTGAATCAGATAGCCAAGAATTAGAGTTGGATCTTTCAAGTTTGGGTGCTGTGAATACAATGTTTGCTGCGCTTTTTAGTAAACTTGGTGTTCCAATTAAGACAACTATTTCAGCAACTGTTTTGGAAGAGGCACTGAATGGTTTGGTGATCATTCATCCCCTTCCATTGGGGCAGCCTATATCTAAAAGGGTTGAGAAGCAATGTGCTCACTTCTATTCAGTTACAATAACAGAAGAGGAAGCAAGGGCTGGATTTGTTTGCCGAGTGCAATCATCAGATAAAAGCAAGTTCAAGTTGTTATATTTTGATCAAGAAGAAAATGGTGGATTAAGTCTTGCACTCCAGGAAGACAGCACAAAAACAGGGAAAGTCACATCTGCTGGAATGTATTTTCTTGGGTTCCCAGTTTATCGCTTGGATCAAACAACAAATTCAATTGCTGCCGCTAAGGATCCAGATACTTCATTTTTCAGAAAGCTCGATGGGTTCCAACCATGTGAATTAACAGAATTGAAGGTTGGCACCCATGTCTTCGCAGTTTATGGTGACAACTTTTTCAAAAGTGCAAGCTATACAATCGAAACTATATGTGCTGCACCTTTGAGTGAGGAAAAAGAGAATCTGAGGAAGGTAGAAGCTCAAATTTTATCAAAAAGGGCAGAGCTATCCAAATTTGAAACTGAATACAGAGAGGTTCTGGCACAATTTACGGAGATGACAAGCAGATACGCCCAAGAAATGCAAGCGATTGATGCTCTACTGAAGCAAAGAAGTGAAATACATGCATCATATACAATTGCTCCTTTAAAGAGGACAAGTAAGAGCAGGAATAAAAGTTCTTCCAAAGAGGCTAAAGAAGATGGACAAGCAAGAGAGAAAAGACATACAAGAGATCGGCCAAAGAAGAAGAAATGGTATAACATACAACTTAGAGTTGATAAGAGAAAGGCTTGCTAAGCGTGTGCACTAGCAAAGAGGAAGGATTTTGTTTGCCAAATCCAGAACCAACTGTTCCGCTCACATATTCATCACTCAAGCATGTCAAGGATGACAACTCATTGTTTTGTAAATTTTTTTTTCATCCGTCCTTTTAAGTTCTCTTTTTAGCTCATCTTCAGAAATCATACATGTAAATTGTTTGATTGATTTGTGAAGCCTGATCATCTCTTTGCACGGTTGTAA 1513 0.4032 MSGSRSKSEKPGAAKQLRRDPYEVLGVSRNSTDQEIKSAYRKMALKYHPDKNANDPQAVDMFKEVTFSYNILSDPDKRSQYDSAGIEAVESDSQELELDLSSLGAVNTMFAALFSKLGVPIKTTISATVLEEALNGLVIIHPLPLGQPISKRVEKQCAHFYSVTITEEEARAGFVCRVQSSDKSKFKLLYFDQEENGGLSLALQEDSTKTGKVTSAGMYFLGFPVYRLDQTTNSIAAAKDPDTSFFRKLDGFQPCELTELKVGTHVFAVYGDNFFKSASYTIETICAAPLSEEKENLRKVEAQILSKRAELSKFETEYREVLAQFTEMTSRYAQEMQAIDALLKQRSEIHASYTIAPLKRTSKSRNKSSSKEAKEDGQAREKRHTRDRPKKKKWYNIQLRVDKRKAC 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00969 407 SUPERFAMILY Chaperone J-domain 19 89 IPR036869 -
Bach10g00969 407 SMART dnaj_3 19 77 IPR001623 -
Bach10g00969 407 ProSiteProfiles dnaJ domain profile. 20 85 IPR001623 -
Bach10g00969 407 Coils Coil 290 317 - -
Bach10g00969 407 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 4 406 - -
Bach10g00969 407 Pfam DnaJ domain 20 82 IPR001623 -
Bach10g00969 407 PRINTS DnaJ domain signature 57 77 IPR001623 -
Bach10g00969 407 PRINTS DnaJ domain signature 40 55 IPR001623 -
Bach10g00969 407 PRINTS DnaJ domain signature 77 96 IPR001623 -
Bach10g00969 407 PRINTS DnaJ domain signature 22 40 IPR001623 -
Bach10g00969 407 CDD DnaJ 20 74 IPR001623 -
Bach10g00969 407 MobiDBLite consensus disorder prediction 354 395 - -
Bach10g00969 407 FunFam Chaperone protein dnaJ 16 4 102 - -
Bach10g00969 407 Gene3D DnaJ domain 4 103 IPR036869 -
Bach10g00969 407 MobiDBLite consensus disorder prediction 1 28 - -
Bach10g00969 407 ProSitePatterns Nt-dnaJ domain signature. 62 81 IPR018253 -
Bach10g00969 407 MobiDBLite consensus disorder prediction 365 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00969 Bach-Chr10 6941416 6945491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00969 13 83 C2H2 Transcription Factor Family AT1G74250 40.789 6.91e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00969 - - gmx:100800929 692.189