Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00966 AAAAAAGAGTATCGTTTGATTCATTTTTACTAAGAAACCACTGAAGAAGAGGGGCAATGATTCTGTGCCGTTCGGCTTTGATGCTTCATCTTCAAACACCATCAATTGGGTCTCATGTGTTGTCTCAGTTCAAGCATACATACTCCTCGTTTCTCTGCAGTTCTACCGTACATGGAATCCGCTTATTTTCACTAACCCGTCTACACCAACGGCAATCCAGGACATTCGGAACCGCAGTTGCGGCAGCAACAGAGACAAAGGGGAGAGACACGTTCTTCGCTGAAGAAAACGTTTCGTGGAATTCACTTGGTTTATCTGATGCAATTTCCCAAGCTCTCTCTAATATTGGCCTCGAAAGACCGTCTCTGGTTCAGGCTTCTTCCATTCCATGCGTGCTTACAGGAAAGGATGTAGTTATTGCGGCGGAGACTGGCAGTGGTAAAACATACAGTTACTTAGTTCCTCTAATTGAAAAGCTACACGGTTCCCATTACAGTTCTGTAAGCACTGCCTCTGATCAACAAGTGTCTCCACCCCGTCAACTTCTGCTTGTTCTTTGTCCAAATGTGCAACTGTGCGATCAAGTGGTCCGGATGGCTAACTGTCTGTTTGGAGAGAACGGCAAACCATTTGTGAACGTGGCAGCTGTTTGTGGCAGACAGGGATGGCCAGTCCGAGAACCTGATGTTATTGTGTCGACACCTGCTGCTCTTTTGAATTATGTTGACCGAGACAAACTCCATCGCATGGAATTTATGCGTGGAGTTAAATATGTGGTGTTTGATGAAGCTGATATGCTTCTTTGTGGGAGCTTCCAGAATAAAGTAATCCGTCTGATACACTTGCTTCGCTATGATGAAAAACTCTTGTCTCAATCAAAAGAATCAACAGCAGAGTTACCAAAGGAATTGGAATCTGTCTTGACATCACACGATGCTTCAGATGGAGAAGAGGAACTACTAACTGAAGCCATCTTAGAAGAGGAGGATGATACTCGGAAAATGGTTGATGTTAACAATGAGGCTGAATCTATCAAAAGAAGAGAGTGGAGGAGAGTGAGGAAATTTTATGAGCGTAGTAAACAGTATATTTTTGTGGCTGCTACACTTCCAGTGAATGGAAAGAAAACAGCTGGGGCAATATTGAAACATATGTTTCCTGATGCCAAATGGGTTAGTGGAAACTATCTCCATTGTCACAATCCAAGATTAGAGCAAAGGTGGATTGAAGTTACAGTTGATACACAGGTGGACGAACTCATAAAGGCTGTGAATCAAGGTTTCAGGTCTGAAAACTTGGATAATGCTGGAGTTAGCCGAACAATGGTGTTTGCCAACACTGTTGAGGCTGTTGAAGCCATTGCAAAAGTATTGCTTCGATCTGGGATTGAATGTTTACGTTATCACAAGAATTGCACCCTGGAGGAACGAGCAGAATCCTTAGTTGAATTCCAAGAGAAAGGTGGTGTTCTTGTATGTACGGATGCAGCTGCTCGTGGCGTCGATGTTCCAAACGTCTTACATGTCATTCAGGCAGATTTTGCTACTTCTGCTGTAGACTTTTTGCATAGGGTTGGTCGTACAGCTAGAGCTGGTGAATTTGGACTTGTGACCAGCATGTACACTGAATCCAATAGAGTGCTTGTTGATGCAGTTCGTCAAGCAGGGAAACTGGGTCAACCTGTGGAGACAGCATTTAGCAGGAAAAGAAGCTTCCGTAACAAGCTCAAGAAGAGTGCTAACAAAGCCAGAGATGCAGCAACTATTGAAGAGAATGCCCTGGCATGAGAAGATGAAATTATTTGACACCCGGTATCTAAACAAACCTGCACCAATATTACTGTGAATGATTTATATATATGTAGTATGTGCCAATTGCTTTGTAAGTGTACTAGCTTCAAAGTGAATCCCTCTCGCTGTTCTTAAGACCCACAAGCAATATTGGGTTTGCTTAACATGGCGAATTCAAACAAAACAAAGAAAGGTTCCTCCTATGAGAATTAGAGAATAGTTTTTGCGTAGTTAACGTGGTTCCTGTTCTTCCATGTAAACTATGAGACGTTTATTCCATGTTGTTGACAGTTTCTTACGTTGTATGTAAATCCCAGTGATTTAATAGAGATTTACGTGTGCCATGTAATCCATTGTTAACCTATTAGTGTTTGACTAGTTTCATA 2176 0.4233 MILCRSALMLHLQTPSIGSHVLSQFKHTYSSFLCSSTVHGIRLFSLTRLHQRQSRTFGTAVAAATETKGRDTFFAEENVSWNSLGLSDAISQALSNIGLERPSLVQASSIPCVLTGKDVVIAAETGSGKTYSYLVPLIEKLHGSHYSSVSTASDQQVSPPRQLLLVLCPNVQLCDQVVRMANCLFGENGKPFVNVAAVCGRQGWPVREPDVIVSTPAALLNYVDRDKLHRMEFMRGVKYVVFDEADMLLCGSFQNKVIRLIHLLRYDEKLLSQSKESTAELPKELESVLTSHDASDGEEELLTEAILEEEDDTRKMVDVNNEAESIKRREWRRVRKFYERSKQYIFVAATLPVNGKKTAGAILKHMFPDAKWVSGNYLHCHNPRLEQRWIEVTVDTQVDELIKAVNQGFRSENLDNAGVSRTMVFANTVEAVEAIAKVLLRSGIECLRYHKNCTLEERAESLVEFQEKGGVLVCTDAAARGVDVPNVLHVIQADFATSAVDFLHRVGRTARAGEFGLVTSMYTESNRVLVDAVRQAGKLGQPVETAFSRKRSFRNKLKKSANKARDAATIEENALA 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00966 576 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 110 369 IPR014001 -
Bach10g00966 576 SMART ultradead3 98 388 IPR014001 -
Bach10g00966 576 CDD DEADc 90 286 - -
Bach10g00966 576 CDD SF2_C_DEAD 385 522 - -
Bach10g00966 576 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 90 549 - -
Bach10g00966 576 Pfam Helicase conserved C-terminal domain 419 513 IPR001650 -
Bach10g00966 576 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 397 576 IPR001650 -
Bach10g00966 576 SMART helicmild6 433 513 IPR001650 -
Bach10g00966 576 Gene3D - 387 575 IPR027417 -
Bach10g00966 576 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 110 525 IPR027417 -
Bach10g00966 576 Pfam DEAD/DEAH box helicase 105 270 IPR011545 GO:0003676|GO:0005524
Bach10g00966 576 Gene3D - 46 367 IPR027417 -
Bach10g00966 576 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 79 107 IPR014014 GO:0003724
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00966 Bach-Chr10 6924347 6928638 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00966 419 526 Eukaryotic Initiation Factors Gene Family AT3G13920 28.440 2.38e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00966 - - gmx:100789323 810.446