Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00954 ATGTCTTGGGTTCACTCAGAAATTCATCAAAGGAGTGGTGCTCTAACTAGCCATCCTGTTATTTCCCCTTCTTCTTCTATATTGCCTTATGATTCTCACTACCAAAAGCAATCAAGTCCACATCCAGTTTCTTCATCTAGCAGTAAAATAAGCCCTGCAGTTATTTTTATTATAGTCATTCTAGCTATTGTTTTTTTCATCTCTGGTCTCCTTCACTTGCTTGTTAGATATCTTGTAAAGCACATGTCTTCTTCATCAACCTCTCAATCCAATAGATACCCAGAAATGTTTGAATCTGATGCTTACCAGAGACAATTACAGCAGCTCTTCCATCTTCATGATTCAGGCCTAGATCAGGCTTTCATAGATGCTCTCCCTGTGTTCCTTTATAAAGAGATAGTAGGTTTAAAAGAGCTGTTTGATTGTGCTGTTTGCCTTTGTGAATTCTCAGAACAAGACAAGCTTAGATTGTTACCCATGTGTAATCATGCTTTTCACATTGACTGCATAGACACATGGTTGCTGTCTAATTCAACTTGTCCTCTCTGTAGAGGTACCCTTTATGCACCAGGCTTTGCCTTAGAAAACCCATTCTCTTACTTTGAAGATCCAAGGGAAGAAGAAAGGGTTTCAGGCTGTGCTGGAGGGGAGGCTGGTCCTGTCCACAAGCCTGCAGAAAATGATATTACTGTTGGAAAAAGGGTGTTTTCTGTTAGACTTGGAAAATTTAGAAGCTCAAATAATGGAGAGGGAGTGGAAAGAAATGAAGGGGAGAGTAGTAACAGTAAGTTGGATGAAAGAAGATGCTATTCAATGGGATCTTGCCAATATGTAGTTGCTGAATGTGACCTGCAAGTGGCTTTAAGCCTTGATCGAGTTAATGCAAGTACCAGTGGCAGTTTTAGACAATCTAAAGGGAGAGCAACTCTCATTGGGAATTCTTCCACTGAAGGGGATGCTGAGGGCAAAAAACTTAACCTTGCAAGGAAAGGTGAAAGCTTTTCCGTTTCCAAGATCTGGCAATGTTCCAAGAAAGGTAAATTGCCAAGTAGTTCAGAAAACCATATGGGCAATTCTACTATCGCTGCAAATTCACCATGGATGATCAGAATAAGAGGTACATGA 1125 0.4036 MSWVHSEIHQRSGALTSHPVISPSSSILPYDSHYQKQSSPHPVSSSSSKISPAVIFIIVILAIVFFISGLLHLLVRYLVKHMSSSSTSQSNRYPEMFESDAYQRQLQQLFHLHDSGLDQAFIDALPVFLYKEIVGLKELFDCAVCLCEFSEQDKLRLLPMCNHAFHIDCIDTWLLSNSTCPLCRGTLYAPGFALENPFSYFEDPREEERVSGCAGGEAGPVHKPAENDITVGKRVFSVRLGKFRSSNNGEGVERNEGESSNSKLDERRCYSMGSCQYVVAECDLQVALSLDRVNASTSGSFRQSKGRATLIGNSSTEGDAEGKKLNLARKGESFSVSKIWQCSKKGKLPSSSENHMGNSTIAANSPWMIRIRGT 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00954 374 FunFam RING-H2 finger protein ATL46 104 189 - -
Bach10g00954 374 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 45 340 - -
Bach10g00954 374 Pfam Ring finger domain 141 184 IPR001841 -
Bach10g00954 374 CDD RING-H2_EL5-like 141 184 - -
Bach10g00954 374 ProSiteProfiles Zinc finger RING-type profile. 142 184 IPR001841 -
Bach10g00954 374 SMART ring_2 142 183 IPR001841 -
Bach10g00954 374 SUPERFAMILY RING/U-box 121 190 - -
Bach10g00954 374 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 102 189 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00954 Bach-Chr10 6807163 6808287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00954 43 352 C3H Transcription Factor Family AT2G18650 41.176 3.05e-54 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00954 - - qsa:O6P43_025322 492.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g00954 10 6807163 6808287 Bach10g00954 10 6807163 6808287 ECH