Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00933 ATGACGAAATCAGAGAACGAGTACAAGAAAGGGCTATGGACTGAGGAGGAAGACAAGATTTTACTTGAATACATCAGGGTGAATGGAAGAAGACAATGGAACCGCATTCCCAAATTAACATGCTTAAAGAGGAATGGGAAAAGCTGTAGATTAAGGTGGGTGAACTATCTGAGCCCAAACGTGAAGCATGGCGATTTCTCAGAGGAAGAAGAAGACCTCATCATTAGACTCCATAACCTCCTTGGAAACAGGTGGTCTCTCATAGCTGGGAGGGTACCAGGAAGAACTGACAACCAAGTGAAGAACCATTGGAACACTCATTTGTGCAAGAAACTTGGCCTCGCGAAGCAAACAAGAAAACACAGGGTGCCCCCAAAACCAAGTGATTCAGAGGTGAAAGGGACTCAAGCAGTGCCTTCGAGTTCAAATTGTGGAACCCTTTCTGCAAGTAGTGATCACAAAGGGGCTGAAGCACAAGGGCAAGGAACCTCTTTGGATGGTTTTGAGGGGTTCAAGGCTGCACAATGGGAAGGAGAGAAGGATTTTGACCGATCTTTATTTTTTTATGACCACAATTTTGTTCTAGATAGTCCTGAATTGATGGAATTCTTTGATGGGTTGACCTAA 627 0.4418 MTKSENEYKKGLWTEEEDKILLEYIRVNGRRQWNRIPKLTCLKRNGKSCRLRWVNYLSPNVKHGDFSEEEEDLIIRLHNLLGNRWSLIAGRVPGRTDNQVKNHWNTHLCKKLGLAKQTRKHRVPPKPSDSEVKGTQAVPSSSNCGTLSASSDHKGAEAQGQGTSLDGFEGFKAAQWEGEKDFDRSLFFYDHNFVLDSPELMEFFDGLT 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00933 208 Gene3D - 2 63 - -
Bach10g00933 208 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 112 IPR017930 -
Bach10g00933 208 SMART sant 62 110 IPR001005 -
Bach10g00933 208 SMART sant 9 59 IPR001005 -
Bach10g00933 208 CDD SANT 66 108 IPR001005 -
Bach10g00933 208 CDD SANT 13 57 IPR001005 -
Bach10g00933 208 Gene3D - 65 136 - -
Bach10g00933 208 ProSiteProfiles Myb-like domain profile. 58 108 IPR001005 -
Bach10g00933 208 FunFam MYB-related transcription factor 9 62 - -
Bach10g00933 208 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 57 IPR017930 -
Bach10g00933 208 FunFam Transcription factor WER 64 135 - -
Bach10g00933 208 SUPERFAMILY Homeodomain-like 8 104 IPR009057 -
Bach10g00933 208 Pfam Myb-like DNA-binding domain 10 57 IPR001005 -
Bach10g00933 208 Pfam Myb-like DNA-binding domain 64 108 IPR001005 -
Bach10g00933 208 ProSiteProfiles Myb-like domain profile. 5 57 IPR001005 -
Bach10g00933 208 MobiDBLite consensus disorder prediction 133 158 - -
Bach10g00933 208 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 5 142 - -
Bach10g00933 208 MobiDBLite consensus disorder prediction 115 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00933 Bach-Chr10 6623267 6624746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00933 5 165 MYB Transcription Factor Family AT5G40330 57.143 9.07e-60 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach10g00933 Myb_DNA-binding 4.3e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00933 K09422 - qsu:112028859 234.187