Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00916 ATGTCTGCACTGAACCATCTCTTTAATCTTCCAGAGCAGACATGCTATGTAAAATGTGGGTTCTGTACCAACATATTAATGCAGTTTATCCACGGTAGTGACAGTAAGATGTGGGCACTGCACAGGCCTCCTTTCTGTTCTTTCGTCCCTTTCCACCTCGTGGCTTCCCTCACTTATCTTGAGCCAAAAGAACGCAGTCAAGAAGAAGATGTGAACAAGAGTTCAGAAAGCCAAAACGCAACCATGGTGACCTATTCTGATTGTGAGGAAGAGGATGTAATTCCAATGATTAACATTGTTAACAAATCCTCAGAGGAGAGACAGCGAACAACTTCAGCTTATAATCGCTTCATGAAAGAAGAAATCAGCAGGTTAAAGGCTGAAAATTCTGACATAGCACACAAGGAAGCATTCAGTACAGCTGCAAAAAATTGGGCCAATTTTCCCCCAAGTCACTACAAAATAGATGAGGAGAGCTGTAGCCAGACAGAACAACTTGTGGATCTGGATTCTCATGTGAAACATCATGATGTTGATAAGGTTAATGAAGAAGGCCCAGATTTTCGTGGAAGAAAGGTTCCAAGGAATTCCATTTGGGAAGGACACCGTTTGAGTGAAGAAAGCCTAGCATGTAGTATAAGAAAACAAGAAAGCTGTTTCTGTCTTCACATTGAAGTTTCTTACAAACTTTGCCTTGTTAAGAAAAATGCTCTCTTGGAAATGAAAGGGAATTTAGTAGGGTCAGGGTTGACGGTATTAGACTTTAGCTTTCAGAGAATGCATAATAATTGGTAG 795 0.4075 MSALNHLFNLPEQTCYVKCGFCTNILMQFIHGSDSKMWALHRPPFCSFVPFHLVASLTYLEPKERSQEEDVNKSSESQNATMVTYSDCEEEDVIPMINIVNKSSEERQRTTSAYNRFMKEEISRLKAENSDIAHKEAFSTAAKNWANFPPSHYKIDEESCSQTEQLVDLDSHVKHHDVDKVNEEGPDFRGRKVPRNSIWEGHRLSEESLACSIRKQESCFCLHIEVSYKLCLVKKNALLEMKGNLVGSGLTVLDFSFQRMHNNW 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00916 264 Pfam YABBY protein 12 154 IPR006780 GO:0007275
Bach10g00916 264 CDD HMG-box_SF 109 151 - -
Bach10g00916 264 Gene3D High mobility group box domain 100 185 IPR036910 -
Bach10g00916 264 PANTHER PROTEIN YABBY 6-RELATED 9 165 IPR006780 GO:0007275
Bach10g00916 264 SUPERFAMILY HMG-box 100 151 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00916 Bach-Chr10 6511459 6513292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00916 2 199 C2C2-YABBY Transcription Factor Family AT1G23420 41.964 5.75e-39 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Bach10g00916 YABBY 8.4e-30 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00916 K25796 - gmx:100806755 247.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g01118 4 7641341 7643143 Bach10g00916 10 6511459 6513292 BWGD
Bach10g00916 10 6511459 6513292 Bach10g00916 10 6511459 6513292 ECH