Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00909 ATGGAGGAAATGTACGGACTGGCATCCACGGGGGAGTTTTCGGAGAAGGCGTTGATGACACCGGAGAATCTGATCATACCGCCGGAGTATCAGAGCTTTTTCATGTCCTCCGGCGTGTTTCGTGACCGGATTCCTATGTTTGGATCGGATGAGTTGCTATCTGCTGCTTCGGCGATTACGGAAGCTGAAGCTTCCATCACTCCAGATGTTCAGCGCGAAGAGGACGCCTCCTCCCTCATAAAAGCCAAAATCGCTTCCCATCCTTACTATCCTCGTCTCCTTCAAGCTTATATCGATTGCCAGATGGTGGGAGCGCCTCCAGAAATTGCATGTTTGTTAGACGAAGTCCGGCGAGAAAACGACCTTTGTAAGCAAGACATTGTTTCCACGTGTTTTGGAGCCGATCCCGAGCTCGACGAGTTCATGGAAACCTACTGTGACATGCTGGTCAAGTATAAATCTGATCTCGCACGCCCTTTTGATGAAGCAACCACGTTCCTCAACAAGATCGAGATGCAGCTTAGCAATCTTACAACTAGTGATTCTGTTCCAACACTTTCCGATGATGGGGATGTATCTTCAGAGGAAGATTTTAGCACTGGAGATGTTGATGCTCAAGATGATCAGTCACGGGTTGAAGATCAAGAACTGAAGGATAGGCTTCTGCGCAAGTTCGGGAGTCACATTAGTACTTTGAAGGTTGAGTTCTCAAAGAAGAAAAAGAAGGGTAAGCTACCAAAGGAAGCCAGGCAAACACTGCTTGAATGGTGGAATGTTCATTACAAATGGCCATACCCGACGGAAGCTGATAAGATTGCACTGACTAAGTCAACAGGGCTAGACCAGAAACAAATTAACAATTGGTTTATAAATCAGAGGAAGCGCCACTGGAAACCATCTGAGAACATGCAATTTTCTATGGTGGATAATCTGACCGGACGATTCTTTACTGATGAATGA 960 0.4635 MEEMYGLASTGEFSEKALMTPENLIIPPEYQSFFMSSGVFRDRIPMFGSDELLSAASAITEAEASITPDVQREEDASSLIKAKIASHPYYPRLLQAYIDCQMVGAPPEIACLLDEVRRENDLCKQDIVSTCFGADPELDEFMETYCDMLVKYKSDLARPFDEATTFLNKIEMQLSNLTTSDSVPTLSDDGDVSSEEDFSTGDVDAQDDQSRVEDQELKDRLLRKFGSHISTLKVEFSKKKKKGKLPKEARQTLLEWWNVHYKWPYPTEADKIALTKSTGLDQKQINNWFINQRKRHWKPSENMQFSMVDNLTGRFFTDE 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00909 319 SMART ELK_2 216 237 IPR005539 GO:0003677
Bach10g00909 319 MobiDBLite consensus disorder prediction 180 213 - -
Bach10g00909 319 FunFam Homeobox protein knotted-1-like 2 241 303 - -
Bach10g00909 319 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 85 306 - -
Bach10g00909 319 CDD homeodomain 248 300 IPR001356 GO:0003677
Bach10g00909 319 Gene3D - 234 307 - -
Bach10g00909 319 SMART KNOX1_2 78 122 IPR005540 GO:0003677|GO:0005634
Bach10g00909 319 Pfam KNOX2 domain 132 178 IPR005541 GO:0003677|GO:0005634
Bach10g00909 319 Pfam Homeobox KN domain 256 295 IPR008422 GO:0003677|GO:0006355
Bach10g00909 319 ProSiteProfiles ELK domain profile. 216 236 IPR005539 GO:0003677
Bach10g00909 319 SMART KNOX2_2 128 179 IPR005541 GO:0003677|GO:0005634
Bach10g00909 319 Pfam KNOX1 domain 80 121 IPR005540 GO:0003677|GO:0005634
Bach10g00909 319 SUPERFAMILY Homeodomain-like 237 310 IPR009057 -
Bach10g00909 319 ProSiteProfiles 'Homeobox' domain profile. 236 299 IPR001356 GO:0003677
Bach10g00909 319 SMART HOX_1 238 303 IPR001356 GO:0003677
Bach10g00909 319 Pfam ELK domain 216 237 IPR005539 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00909 Bach-Chr10 6445605 6453282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00909 1 319 Homeobox Transcription Factor Family AT1G23380 66.565 1.70e-150 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Bach10g00909 KNOX2 2.4e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00909 - - qsa:O6P43_025268 494.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g01106 4 7545914 7553791 Bach10g00909 10 6445605 6453282 BWGD