Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00884 ATGGAAGAAGCGCTTAGGCGGCTGAACGGGATGGCTCCGATGCCAGAACCGGATCCTGTTGGCTGCATTTCCGACCACCAGAAGAAGTGTGCAACCGCAACGCCACCCAATAAGACGAACTTAAGAGAAAACGGTGGTGGATCTGGCGGCACTTTAAGGTACCGTGGAGTTCGGCGTAGGCCATGGGGACGTTACGCCGCCGAGATAAGGGACCCGCAGTCAAAGGAGCGCCGCTGGCTCGGAACCTTCGACACGGCTGAGGAAGCCGCCTGCGCATACGATTGCGCGGCCCGAGCCATGCGTGGCCCTAAAGCTCGAACTAATTTTGTCTACCCAACTTCACCGCCGCACTCCGCCAATGACCACCACCTTTTCCCTCCCTTCAAGTTCCTGAAAGAATCGCAGATGTCCATCAACAAAACCCAAAATAACCGCCATTTGGGAGCTTCAGCTTCTAATTGGTCTTCTTACTCTAATGTTCCTGTGGATGACTTTTCATCTTCTGCAGCGTCGCAGAGAAGCTCATCACTTAACATGCTTCTCCTTCGTGATTTCCTCTATTCTTCTAACCCATCTTTGATTTGTTCCCCTCAGCCATTTTACGAGCAGTTGCCCTACAACATCAGCACCGCTTCATTACCGTCATCTACTTGTTCATGTTCTTGTTCATCATCATCCTTACCCATCTCTAGTGCTGGGTTCTCTGCTTGCTGCTTGGTGAATTCTTGTAATGGCGTTGCTGGGTCTTCTTCCAACGTGTTGAGTCAGAGTCACCAAAATTGTGCAGTGAAGAGTTCTGAAACTGATGATGACTTGGAGCTCTTTCCCAGAGAGCCTTCAGACTCAGGATTGTTGGAAGACGTTATTTATAGGTTCTTCCCAAAGTCAAAGTCCAAGAAACGTGAGACTAGTCCACCAAAAACAGAAGCTTTATCCTTCCCTGAGTCACTTCCTCCGATCCCAGTGTCTGACATGTTCGTTTCCACCACTCAGAGCTATGATGAGACGAGGAGGAGGCTTATAACGAATGAGCCTTTTGTTGTCTCTCTCGATCAACAAGGTTTCCCCGTGCAGCAATTAGATAGCTTTAATGGGTTTAACCCCATGCAGTCTCTGCCATTTGGGAGTGACCAGTTAATGTTGATGAGTGATTTAGACTGTTCTTTGGTGAAAAATGTTTTCTAG 1185 0.4878 MEEALRRLNGMAPMPEPDPVGCISDHQKKCATATPPNKTNLRENGGGSGGTLRYRGVRRRPWGRYAAEIRDPQSKERRWLGTFDTAEEAACAYDCAARAMRGPKARTNFVYPTSPPHSANDHHLFPPFKFLKESQMSINKTQNNRHLGASASNWSSYSNVPVDDFSSSAASQRSSSLNMLLLRDFLYSSNPSLICSPQPFYEQLPYNISTASLPSSTCSCSCSSSSLPISSAGFSACCLVNSCNGVAGSSSNVLSQSHQNCAVKSSETDDDLELFPREPSDSGLLEDVIYRFFPKSKSKKRETSPPKTEALSFPESLPPIPVSDMFVSTTQSYDETRRRLITNEPFVVSLDQQGFPVQQLDSFNGFNPMQSLPFGSDQLMLMSDLDCSLVKNVF 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00884 394 PRINTS Ethylene responsive element binding protein signature 54 65 IPR001471 GO:0003700|GO:0006355
Bach10g00884 394 PRINTS Ethylene responsive element binding protein signature 76 92 IPR001471 GO:0003700|GO:0006355
Bach10g00884 394 FunFam Ethylene-responsive transcription factor 2 53 111 - -
Bach10g00884 394 MobiDBLite consensus disorder prediction 32 54 - -
Bach10g00884 394 SMART rav1_2 53 116 IPR001471 GO:0003700|GO:0006355
Bach10g00884 394 CDD AP2 53 109 IPR001471 GO:0003700|GO:0006355
Bach10g00884 394 ProSiteProfiles AP2/ERF domain profile. 53 110 IPR001471 GO:0003700|GO:0006355
Bach10g00884 394 Gene3D AP2/ERF domain 53 111 IPR036955 GO:0003700|GO:0006355
Bach10g00884 394 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 39 253 - -
Bach10g00884 394 SUPERFAMILY DNA-binding domain 53 110 IPR016177 GO:0003677
Bach10g00884 394 MobiDBLite consensus disorder prediction 32 46 - -
Bach10g00884 394 Pfam AP2 domain 53 102 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00884 Bach-Chr10 6259151 6260335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00884 51 131 AP2-EREBP Transcription Factor Family AT1G24590 77.108 4.47e-37 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach10g00884 AP2 1.6e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00884 - - qsa:O6P43_025236 299.671