Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00877 ATGGAATTTGAAGATCAAGAAGAACAAGAGGAAGAGATGGGCATGGCGGCAGCGAGTTACGACTCGCTGGGTAACTCGTCCCGAGTGAAAATGCCGAACTCGGTAGTTGCCGAAGGAGGAGGAGAAGTGATGCTGGCGCAGCCAACGAGGATTGGCAACAGCAAGGGAAGATACAGGGAGTGCTTGAAGAACCACGCGGTGAGTATTGGTGGACACGCGCTTGATGGGTGCGGAGAGTTCATGGCAGCTGGAGCCGAAGGCACTATCGACGCTTTGAAATGCGCCGCCTGTAACTGCCACCGGAATTTCCATCGTAAAGAGACGGACACAATTGGCGGCGGAGTGATGGGAGACCCGTATTTGTTGACCCATCACCCGCACCCGGCTCATTTCGCAGCTTATTATCGAACGCCGTCTGGGTACTTGCACGTGGCTGGACAACAGAGGGGGACAGCGACGCTAGCGTTGCCGTCGACGTCAGGAGGTGGTGGTGGGACCCAGAGTACTCGGGATGATCAAGAAGACGTTTCGAACCTAAGTGCAGGAGGGTCCAAGAAGAGGTTCAGGACAAGGTTCACGCAGGAACAGAAGGACAAAATGCTAGCTTTGGCTGAGAGATTGGGTTGGAGGATTCAGAAGCACGACGAGGCTGTGGTTCAGGAGTTCTGTAACGACACCGGTGTGAAGCGTCAAGTTCTTAAAGTTTGGATGCATAATAACAAGCACACTCTGGGTAAGAAGCCCTAG 747 0.5382 MEFEDQEEQEEEMGMAAASYDSLGNSSRVKMPNSVVAEGGGEVMLAQPTRIGNSKGRYRECLKNHAVSIGGHALDGCGEFMAAGAEGTIDALKCAACNCHRNFHRKETDTIGGGVMGDPYLLTHHPHPAHFAAYYRTPSGYLHVAGQQRGTATLALPSTSGGGGGTQSTRDDQEDVSNLSAGGSKKRFRTRFTQEQKDKMLALAERLGWRIQKHDEAVVQEFCNDTGVKRQVLKVWMHNNKHTLGKKP 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00877 248 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 58 107 IPR006456 -
Bach10g00877 248 Pfam ZF-HD protein dimerisation region 57 108 IPR006456 -
Bach10g00877 248 Gene3D - 169 246 - -
Bach10g00877 248 MobiDBLite consensus disorder prediction 153 183 - -
Bach10g00877 248 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 42 244 - -
Bach10g00877 248 NCBIfam homeobox domain, ZF-HD class 185 241 IPR006455 -
Bach10g00877 248 SUPERFAMILY Homeodomain-like 178 246 IPR009057 -
Bach10g00877 248 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 57 107 IPR006456 -
Bach10g00877 248 FunFam Zinc-finger homeodomain protein 2 172 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00877 Bach-Chr10 6208936 6209682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00877 1 244 ZF-HD Transcription Factor Family AT4G24660 50.407 2.04e-73 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Bach10g00877 ZF-HD_dimer 1.3e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00877 - - qsa:O6P43_025228 328.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g01064 4 7255077 7255829 Bach10g00877 10 6208936 6209682 BWGD