Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00861 ATGGCGAGAGCAACTCATTGGCTATCTTTTGCTTCGCCGGAAATGCCGAGGCTCTCGGAACCTCAGTTTGCTCAATACGACAGCTCGTCAGCTACCTCTCACTACTTCGTCGACAATTACTTTGCTAATGGGTGGGCAAACCCCAAGCCTCAGGTTCTGTACACACCGTTGGAGCAAAACCAGAGCAAAGACAGCCAAGCACAAAGCATGACGGAATCATCCATCCTCACAAGCTTCATGGACCCACACCATCAAAACCAAGAAGTTCCCAAATTTGAAGATTTTCTCGGCGGTGAATCCTCCTCGATCATGCGCTATTCTGACAGCCAAACGGAGACTCAAGAGTCCTCTCTCACTCAGATATACGATCATGGCTCAGCTTATTTCAGTGACCAGCAGGATCTGAAAGCAATTGCTGGCTTTCAGGCTTTCTCCACCAACTCCGGTTCTGAAGTGGATGACTCAGCCTCGATCGCCAAAAGTCATACCGCTTGCGCTGAGTTCGCAACTCACTCCATTGAGTCATCGGGAAACGAGTTGGCTTTCTCTAGCTGCGCCACCGCTGGTGCTTTGTCTCTCGGCGTCACTCAAACTTCTGACAAGGCCATTGTGGCGGTGGATTCCAATACCTCCAAGAAGGTTGTCAACACCTTTGGCCAGCGAACTTCAATTTACAGAGGAGTGACCAGACACAGGTGGACGGGTAGATATGAAGCGCACCTATGGGACAACAGCTGTAGAAGAGAGGGTCAGGCGAGGAAAGGGCGTCAAGGTGGATATGACAAGGAAGAAAAGGCCGCTAGATCTTATGATTTGGCAGCTCTGAAGTACTGGGGCCCCACCGCTACCACCAACTTCCCTGTTTCCAACTATACAAAGGAGTTGGAGGACATGAAACACGTAACGAAGCAAGAGTTTATTGCATCACTGCGAAGGAAAAGTAGTGGTTTTTCAAGGGGAGCTTCTATCTACAGGGGTGTGACAAGGCATCATCAGCAAGGTAGATGGCAAGCAAGAATCGGTCGTGTTGCTGGCAACAAAGATCTGTACCTTGGAACATTTGCTACTGAGGAAGAAGCAGCAGAGGCATATGACATTGCTGCTATTAAGTTCAGAGGAGCCAATGCTGTAACCAATTTTGAGATGAGCAGATATGATGTTGATGCTATCATCAAGAGTTCTCTTCCAATTGGTGGAGCTGCTAAACGATTGAAGCTTTCGTTGGAATCAGAGCAGAAGGATCCTTCGAACATTAACCAGCAAGCCCAATGTAGAGACGTGAATAGCAGCATCAATTTCTCAGCCATTCAGCCAGTTGCTTCAATCCCATGTGGAGTTCCCTTTGATCCTGCAACAGCTTATTATCACCTTAACGTCTTCCACCATTATCTACCAAGCACCACCACCACAGCGGTGTCTGCTGTATCTACCACCGCCGCAGCACCATTGACAGCACCACCACCACCAGCAACGGCTCCCGAATTTTTCTTATGGCCTCACCAGTCATACTGA 1512 0.4881 MARATHWLSFASPEMPRLSEPQFAQYDSSSATSHYFVDNYFANGWANPKPQVLYTPLEQNQSKDSQAQSMTESSILTSFMDPHHQNQEVPKFEDFLGGESSSIMRYSDSQTETQESSLTQIYDHGSAYFSDQQDLKAIAGFQAFSTNSGSEVDDSASIAKSHTACAEFATHSIESSGNELAFSSCATAGALSLGVTQTSDKAIVAVDSNTSKKVVNTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQGGYDKEEKAARSYDLAALKYWGPTATTNFPVSNYTKELEDMKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGANAVTNFEMSRYDVDAIIKSSLPIGGAAKRLKLSLESEQKDPSNINQQAQCRDVNSSINFSAIQPVASIPCGVPFDPATAYYHLNVFHHYLPSTTTTAVSAVSTTAAAPLTAPPPPATAPEFFLWPHQSY 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00861 503 SMART rav1_2 323 387 IPR001471 GO:0003700|GO:0006355
Bach10g00861 503 SMART rav1_2 224 293 IPR001471 GO:0003700|GO:0006355
Bach10g00861 503 FunFam AP2-like ethylene-responsive transcription factor 322 383 - -
Bach10g00861 503 FunFam AP2-like ethylene-responsive transcription factor ANT 223 289 - -
Bach10g00861 503 ProSiteProfiles AP2/ERF domain profile. 323 381 IPR001471 GO:0003700|GO:0006355
Bach10g00861 503 ProSiteProfiles AP2/ERF domain profile. 224 287 IPR001471 GO:0003700|GO:0006355
Bach10g00861 503 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 84 418 - -
Bach10g00861 503 SUPERFAMILY DNA-binding domain 322 383 IPR016177 GO:0003677
Bach10g00861 503 Gene3D AP2/ERF domain 224 289 IPR036955 GO:0003700|GO:0006355
Bach10g00861 503 Gene3D AP2/ERF domain 323 383 IPR036955 GO:0003700|GO:0006355
Bach10g00861 503 Pfam AP2 domain 224 279 IPR001471 GO:0003700|GO:0006355
Bach10g00861 503 Pfam AP2 domain 323 373 IPR001471 GO:0003700|GO:0006355
Bach10g00861 503 PRINTS Ethylene responsive element binding protein signature 225 236 IPR001471 GO:0003700|GO:0006355
Bach10g00861 503 PRINTS Ethylene responsive element binding protein signature 363 383 IPR001471 GO:0003700|GO:0006355
Bach10g00861 503 CDD AP2 322 383 IPR001471 GO:0003700|GO:0006355
Bach10g00861 503 SUPERFAMILY DNA-binding domain 223 289 IPR016177 GO:0003677
Bach10g00861 503 CDD AP2 223 289 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00861 Bach-Chr10 6087933 6091841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00861 45 503 AP2-EREBP Transcription Factor Family AT5G10510 56.673 9.21e-177 506
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Bach10g00861 AP2 1.1e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00861 K09285 - qsa:O6P43_025207 737.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g01043 4 7054553 7058755 Bach10g00861 10 6087933 6091841 BWGD