Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00841 ATGCATGGCTTCAAATTTCAATCAACAGCACAGAAGCAAGATCTTCTGTTCCTGGTGATTGAGAATGGCTTGGTTCGTGTCATTTTGTCAATGGACGGCTTTGTCGTTGGTATATCATATAATGGAATTGACAATGTACTTGCTCCTCACGAGTATATAGATAGAGGGTATTGGGACGTTGTTTGGAATGAACCAGGTAGTAAAAGCAATACTGACAGAATCACGGGGGCAAAATTTTCGGTGGTATCAAAAAATGACGATCGAATAGAGCTTTCATTTCTAAAAGCATGGGCATCGTCCATGAGAGGCACAAGTGTCCCTATGAACATAGACAAAAGGTATATATTTCGTAGAGGTGACTCAGGGTTTTATGTGTATGGAATATTTGAGCGTACAAAAGGAATGCCGGCAGTGGAGATTGATCAAATTAGGGTTGTTTTCAAGCTTCGAGAAGATAGGTTCAACTATATGGCTATATCAGACTCGAGGCAAAGAATCATGCCAAGCATGAAAGATAGACAAACTGGCCAACCTCTTGCATATCCTGAAGCTGTTCTCTTAACCAGGCCAATAAACCCACAACTTAAAGGAGAGGTGGATGACAAATATCAGTACTCGTGTGAGAACAAAGATAACACTGTTCATGGCTGGATCAGTTCTCATTCCCCTGCACCTGTTGGCTTCTGGATGATAACACCCAGCAATGAATTTCGAAATGGTGGGCCAATCAAGCAAGATCTGACATCCCATACTGGCCCCATCACCCTCAACATGTTTGTTAGCACCCACTATGCTGGGAAGGAAGTAACAATGGCGTTCCAACAAGGGGAGACTTATAAAAAGGTTTTCGGTCCTGTTTTTGTCTACCTTAACTCAGCTCTTCCAAACAACCAGGACTCTGTTGCAAAAGAGCTGCTATGGACAGACGCTAAAAATCAGATGTCTAAAGAAGTCCAAAGATGGCCCTACGATTTCCCTCAGGCACCAGATTACTTTCCACCCAATAAACGGGGAACAGTCTCTGGACAATTACTTATCCAAGACTGGTACATCAAAAAACTGAAATATCAATATGCTGACTCTGCATATGTTGGTCTTGCTCTCCCCGGAGAAGCAGGATCATGGCAAAGAGAAAGCAAGGGTTACCAATTCTGGACCCAAGCAAACAATAAAGGCTACTTCACAATTAAAAATGTTGTGCCCGGGGACTACAATTTGTATGCTTGGGTTCCTGGCGTTATTGGCGATTATAGATATGATGCTATCATTACCATCAGACCAGGAGGTTTCATCAAACTGGGTTCACTTACATATAGTCCTCCAAGAAATGGCCCTACCATTTGGGAAATTGGCATCCCTGACCGTTCAGCAGCAGAGTTCTACGTACCAGACCCTTACCCTTGGCTCACCAACAGATTATATAAAGCAGACCCCAAAGAGAAGTTCAGGCAATACGGCTTGTGGGAACATTATGCTGATTTGTATAAAAATAATGACCTGGTTTACAATGTGGGTGTTAGCGATTACAGTAAAGATTGGTTCTTTGCGCATGTTACCAGGAAGACAGGATATGACACATACAAGCCGACAACATGGCAGATTGTTTTTCATCTTCCAAATGTTGCAAAGAGTGGAAACTACACATTCCGAATAGCCTTGGCATCTGCCGCTGTTTCTGAACTGCAGGTTCGCGTCAATGATCCAAAATCTATTCGACCACTTTTTACAACAGGTCAAATAGGCGGGGACAGCTCCATAGCGAGGCATGGCATTCATGGATTGTATTGGTTGTTCAACGTTGATATGCCTTGTAATCGACTATTCAGAGGAAAGAACAGCATATATCTAAGACAGTCAAAAGCCACTACTCCTTTCCTAGGAGTTATGTATGACTATATCCGCTTAGAAAAACCTCCATCTCCGAGGACATAA 1932 0.427 MHGFKFQSTAQKQDLLFLVIENGLVRVILSMDGFVVGISYNGIDNVLAPHEYIDRGYWDVVWNEPGSKSNTDRITGAKFSVVSKNDDRIELSFLKAWASSMRGTSVPMNIDKRYIFRRGDSGFYVYGIFERTKGMPAVEIDQIRVVFKLREDRFNYMAISDSRQRIMPSMKDRQTGQPLAYPEAVLLTRPINPQLKGEVDDKYQYSCENKDNTVHGWISSHSPAPVGFWMITPSNEFRNGGPIKQDLTSHTGPITLNMFVSTHYAGKEVTMAFQQGETYKKVFGPVFVYLNSALPNNQDSVAKELLWTDAKNQMSKEVQRWPYDFPQAPDYFPPNKRGTVSGQLLIQDWYIKKLKYQYADSAYVGLALPGEAGSWQRESKGYQFWTQANNKGYFTIKNVVPGDYNLYAWVPGVIGDYRYDAIITIRPGGFIKLGSLTYSPPRNGPTIWEIGIPDRSAAEFYVPDPYPWLTNRLYKADPKEKFRQYGLWEHYADLYKNNDLVYNVGVSDYSKDWFFAHVTRKTGYDTYKPTTWQIVFHLPNVAKSGNYTFRIALASAAVSELQVRVNDPKSIRPLFTTGQIGGDSSIARHGIHGLYWLFNVDMPCNRLFRGKNSIYLRQSKATTPFLGVMYDYIRLEKPPSPRT 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00841 643 Pfam Rhamnogalacturonate lyase family 18 199 IPR010325 -
Bach10g00841 643 SUPERFAMILY Galactose-binding domain-like 443 636 IPR008979 -
Bach10g00841 643 Gene3D - 8 305 IPR014718 GO:0030246
Bach10g00841 643 Pfam Polysaccharide lyase family 4, domain II 360 429 IPR029413 -
Bach10g00841 643 SUPERFAMILY Starch-binding domain-like 332 432 IPR013784 GO:0030246
Bach10g00841 643 Gene3D - 443 636 - -
Bach10g00841 643 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 9 639 - -
Bach10g00841 643 CDD RGL4_C 448 636 - -
Bach10g00841 643 CDD RGL4_N 18 293 - -
Bach10g00841 643 FunFam Rhamnogalacturonate lyase B 333 433 - -
Bach10g00841 643 CDD RGL4_M 336 436 IPR029413 -
Bach10g00841 643 Pfam Polysaccharide lyase family 4, domain III 446 635 IPR029411 -
Bach10g00841 643 SUPERFAMILY Galactose mutarotase-like 21 292 IPR011013 GO:0003824|GO:0005975|GO:0030246
Bach10g00841 643 Gene3D - 333 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00841 Bach-Chr10 5957306 5961502 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00841 18 638 Polysaccharide Lyase AT1G09890 56.320 0.0 723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00841 K18195 - gmx:100776664 896.73