Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00837 ATGACTGAGAGCAGGAGTTTTCCTCTAAATTTCAAATATGAGAAAAATCCCAGTTTGATGGCTAGAGAAGTGAATGACTCTTTCCTATGGCACAAGAGACTTGGACACTTGAACTTCAAGGGTCTTAAGTTACTTTTTCAAAAGAATATGGTGTACGGGCTACCAACAATTGAAGAAAAATCTGGAGTGTGTGAAGGATGCATGCTAGGAAAACACTACCGCCAATCATTCCCAAAAGAAGGAGCATGGAGAGCCAAACAAGTGTTGGAGTTAGTATACACAGATGTATGCGGTCCTATGAGTACCTTGTCTCATGCCCAAAATAGGTACTTTATCTTATTCATTGATGATTTTACTCGCATGACATGGGTATATTTTATGAGACAAAAATCTGAAGTATTTGGGGTGTTTAAGAAATTCAAAGCATTTGTTGAAAAACAAAGTGGTAGATTTATAAAAGTTTTGAGAAGTAATAGGGGGAAGGAGTACACCTCAAATGAATTTGATAAATTCTGTGAAGATGAAAGGATAAATAAGCAGTTGACTGTTGGCTATACACCTCAACAAAACGGTGTGTCCGAGAGGAAGAATCAAACTGTGATGGAGATGGCAAAATCTATGTTGTTTGAGAAGGGAATGCCTAAAGCTTTTTGGCCAGAAGCTGTTAATACAGCTGTGTATTTACTGAATCGATGTCCAACAAAAGCAGTGTGGAATATGACTTCATTTGAAGCATGGAGTGGAAAAAAACCTTTAGTAAACCACCTTAAAACTTTTGGGTGTGTTTGCTATGCTCAAGTTCCCAAAGGGAATATATTTCAATCTTCTGCAGAAGCTGAATATATTTCAGCTGGCTTAGCAACACAACAAGCTATTTGGTTGAAAAGAATACTTGAAGACATTGGAGAAAATCAAGGTGTTGTGAATATCCATTGTGACAACAAATCAGCCATTGCTATGGCAAAGAATCCAGTTTTTCATGGAAGATCAAAGCATATAGCAATTAAGCATCATTTCATACAAGAAGCAATTGAAAAAGAAGAAATGCAGCTGAAGTTTTGCAAGTCCAGTGACCAACTTGCAGATATTTTCACAAAGGCTTTAGCAAGAGACAAAGTCCAGCAATTAAGAGAAGCTCTTGGAATTTGGAAAAGGGAGGCAGAAATATTAAGGCAGCAACTACAGAATCTACAAGAAAACCATCGGCAATTGATGGGAGAACAGCTTTATGGTTTGAGTTTAAGAAACCTACAAGACCTTGAGAATCAACTGGAAATGAGTCTCCGAGGTGTCCGCATGAAAAAGGAACACATTCTAACAGACGAAATCCAAGAGTTGAGCCAAAAGGGAAATCTTATCCATCAGGAAAATGTGGAACTCTATAAGAAGGTCAACCTCATTCAACAAGAAAACATGCAACTATACAAGAAGGTTTATGGTACAACAGATGTGACAGCAGCAAGTAGAAACGGATTTGTTCCATATAGTATCCAAGGAGGAGAGGATTCACAAGCATTGATCCAACTTCAGCTATCCCAGCCTGAGCAACAAGACTATGAGACATCAGGCAGTGCCACAAAATGA 1584 0.3826 MTESRSFPLNFKYEKNPSLMAREVNDSFLWHKRLGHLNFKGLKLLFQKNMVYGLPTIEEKSGVCEGCMLGKHYRQSFPKEGAWRAKQVLELVYTDVCGPMSTLSHAQNRYFILFIDDFTRMTWVYFMRQKSEVFGVFKKFKAFVEKQSGRFIKVLRSNRGKEYTSNEFDKFCEDERINKQLTVGYTPQQNGVSERKNQTVMEMAKSMLFEKGMPKAFWPEAVNTAVYLLNRCPTKAVWNMTSFEAWSGKKPLVNHLKTFGCVCYAQVPKGNIFQSSAEAEYISAGLATQQAIWLKRILEDIGENQGVVNIHCDNKSAIAMAKNPVFHGRSKHIAIKHHFIQEAIEKEEMQLKFCKSSDQLADIFTKALARDKVQQLREALGIWKREAEILRQQLQNLQENHRQLMGEQLYGLSLRNLQDLENQLEMSLRGVRMKKEHILTDEIQELSQKGNLIHQENVELYKKVNLIQQENMQLYKKVYGTTDVTAASRNGFVPYSIQGGEDSQALIQLQLSQPEQQDYETSGSATK 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00837 527 Pfam K-box region 383 464 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bach10g00837 527 Pfam GAG-pre-integrase domain 10 72 IPR025724 -
Bach10g00837 527 SUPERFAMILY Ribonuclease H-like 83 244 IPR012337 -
Bach10g00837 527 ProSiteProfiles K-box domain profile. 380 470 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bach10g00837 527 CDD RNase_HI_RT_Ty1 274 371 - -
Bach10g00837 527 Gene3D - 82 259 IPR036397 GO:0003676
Bach10g00837 527 PANTHER GAG-POL-RELATED RETROTRANSPOSON 114 250 - -
Bach10g00837 527 ProSiteProfiles Integrase catalytic domain profile. 74 250 IPR001584 GO:0015074
Bach10g00837 527 Pfam Integrase core domain 87 185 IPR001584 GO:0015074
Bach10g00837 527 Coils Coil 373 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00837 Bach-Chr10 5926423 5929845 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00837 383 527 MADS-box Gene Family AT3G57230 53.793 2.84e-45 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00837 - - vvo:131594177 392.889