Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00816 ATGACGGAGTATCGGTTACCGCCGACAATGAATCTTTGGAGCGATGACAATTCATCGGTGATGGACGCTTTCCTGAGCTCTGATCTATCTGCCTTGTGGCCTCCTCCGTCACAGCCGCAATCTTCCGCTTCCACAACAAATCCTGGACCTGATCCCACCAAAGCTCTTGCCCAACAAACTCAGCCGCCGGTTGCTCTCTTCAGCCAGGAGACTCTTCAGCAGCGGCTTCAAGCGCTGATTGAGGGTGCCAGGGAGAGTTGGACCTACGCCATCTTCTGGCAGTCATCCTATGATTTTTCTGGAACTTCGGTGTTGGGTTGGGGTGATGGGTACTATAAAGGGGAAGACGATAAATCGAAAGGCAAGGTCAAACCATTGTCGTCTGACGCCGAGCAGAGCCATCGGAAGAAGGTTCTCCGTGAGCTTAATTCGCTCATTTCTGGCTCATCGGCAACAACTGACGATACCGTCGATGAAGAAGTCACCGACACCGAGTGGTTCTTCCTCGTTTCTATGACTCAATCGTTTATGGACGACGTTGGATTGCCGGGCCAGGCGTTCTTCAACTCGAGCCCTGTTTGGGTCACTGGTGGGGACCGTCTAGGGGCTTCGACGTGCGAGAGGGCGAGGCAGGGCCAGGTGTTTGGGCTTCAGACCTTGGTTTGCATACCGTTGGCGAATGGGGTCGTGGAGCTGGGTTCCACCGAGCTCATTTTTCAGAATTCTGATTTGATGAATAAGGTGAGGGTTTTGTTCAATTTTGACAATCTGGAAGTAGGTTCGTGGCCCTTGACTGGTGGTGCCGATCAGGGCGAGAACGACCCCTCATCACTTTGGCTTAACGATCCCTCTGAAATCAGGGATGCGGTGAACAATGTTGTTCCAGCTTCAGTTCCGAGCTCAAACAATACTAACACCAATCAGACAATTGCAAAGCCGATTCAGTTCGAGACTCCAGGTTCCAGTACTTTAACGGAAGCCCCGAGTGCCATTCATATTCCAAACACTCCCCACAGTAACCCGCAACGACAACAGCCACATCAATCACAGACACAGGGTTTCTTTTCTAGGGAATTGAACTTTTCCGACTACGTGTGTGATGCCAATGGGGTGAAGAACAGTAATTCGCATTCTTTAAAGCCGGAATCGGGTGAGATTTTGAATTTTGGCGAGAGCAAGAGGACCTCTTATAGCGCAAATGGGAATTTCTTCTCTGGTCATTCCCAATTCGTTCCAGAGGAGAACAAGAAGAGGAAGTCGCCGACATCCAGGGGTAGTAATGAGGAAGGTATGCTTTCGTTTACGTCGGGTGTGATTTTGCCAGCTTCAACTATGAAGTCCAGTGGTGGCGGCGGTGCCGATTCTGATCACTCCGATCTTGAAGCTTCAGTGGTAAAGGAGGCTGATAGCAGCAGAGTGGTAGAACCAGAAAAACGACCTCGGAAAAGAGGCAGAAAGCCCGCAAATGGCAGAGAGGAGCCTTTGAATCACGTTGAAGCAGAGAGGCAAAGAAGGGAGAAGCTGAATCAAAGGTTCTATGCTCTTCGTGCAGTGGTTCCAAATGTGTCGAAGATGGACAAAGCATCCCTTCTGGGTGATGCTATCTCTTACATTAACGAGCTCAAGTCGAAACTTCAGAATCTAGAATCAAGTAAAGAGGATGTGCAGAAAGAATTGAATTCAGTCAAGAAGGAGCTTGAACTGGCCAGCAAAGAATCGCGCTATCCGGGTTCAGGGGCACCTCCATCAGACAAAGACCTTAAGACGAACAATCCCCATGGAAGCAACCTAATAGATTTAGAAATTGACGTGAAGATTATTGGTTGGGATGCCATGATTCGAATCCAATGTACCAGGAAGAACCACCCAGCAGCGAGGTTGATGGCAGCTCTGATGGAGCTAGACCTTGATGTGCACCATGCAAGTGTGTCTGTGGTGAATGATTTGATGATCCAACAAGCGACGGTGAAGATGGGAAGCAGATTTTACACGCAGGAGCAGCTCCGGTTAGCACTATCGTCCAAAGTTGGCGATGTCCGATAA 2043 0.4953 MTEYRLPPTMNLWSDDNSSVMDAFLSSDLSALWPPPSQPQSSASTTNPGPDPTKALAQQTQPPVALFSQETLQQRLQALIEGARESWTYAIFWQSSYDFSGTSVLGWGDGYYKGEDDKSKGKVKPLSSDAEQSHRKKVLRELNSLISGSSATTDDTVDEEVTDTEWFFLVSMTQSFMDDVGLPGQAFFNSSPVWVTGGDRLGASTCERARQGQVFGLQTLVCIPLANGVVELGSTELIFQNSDLMNKVRVLFNFDNLEVGSWPLTGGADQGENDPSSLWLNDPSEIRDAVNNVVPASVPSSNNTNTNQTIAKPIQFETPGSSTLTEAPSAIHIPNTPHSNPQRQQPHQSQTQGFFSRELNFSDYVCDANGVKNSNSHSLKPESGEILNFGESKRTSYSANGNFFSGHSQFVPEENKKRKSPTSRGSNEEGMLSFTSGVILPASTMKSSGGGGADSDHSDLEASVVKEADSSRVVEPEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELKSKLQNLESSKEDVQKELNSVKKELELASKESRYPGSGAPPSDKDLKTNNPHGSNLIDLEIDVKIIGWDAMIRIQCTRKNHPAARLMAALMELDLDVHHASVSVVNDLMIQQATVKMGSRFYTQEQLRLALSSKVGDVR 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00816 680 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 495 561 IPR036638 GO:0046983
Bach10g00816 680 SMART finulus 498 547 IPR011598 GO:0046983
Bach10g00816 680 Pfam Helix-loop-helix DNA-binding domain 496 541 IPR011598 GO:0046983
Bach10g00816 680 Gene3D - 484 572 IPR036638 GO:0046983
Bach10g00816 680 MobiDBLite consensus disorder prediction 31 60 - -
Bach10g00816 680 MobiDBLite consensus disorder prediction 459 502 - -
Bach10g00816 680 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 72 252 IPR025610 -
Bach10g00816 680 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 492 541 IPR011598 GO:0046983
Bach10g00816 680 MobiDBLite consensus disorder prediction 425 451 - -
Bach10g00816 680 PANTHER MYC 60 675 IPR045084 GO:0003700|GO:0006355
Bach10g00816 680 MobiDBLite consensus disorder prediction 318 352 - -
Bach10g00816 680 MobiDBLite consensus disorder prediction 400 502 - -
Bach10g00816 680 MobiDBLite consensus disorder prediction 569 592 - -
Bach10g00816 680 FunFam Transcription factor bHLH13 485 559 - -
Bach10g00816 680 CDD bHLH_AtAIB_like 489 565 - -
Bach10g00816 680 Coils Coil 538 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00816 Bach-Chr10 5768160 5770202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00816 1 677 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 56.772 0.0 669
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach10g00816 bHLH-MYC_N 3.1e-55 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00816 K13422 - vvi:100250607 948.347