Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00808 ATGGGATCTCTTGGCAACCCAAGAACTTGGATTCCATATATGAACACCAAAGATTGTTCTCAAGGTTTCTGTAGCTTGTACTGCCCACAGTGGTGCTATGTAGTGAATCCTCCACCACCTCCCTATGAATTTCCAGAGGAAGATTCAAGCCCCAATTTCTCCCCGCTTGTTATTACGATCATCGGGATTTTGGCAAGTGCTTTTCTTCTTGTAAGTTACTATACTGTAATCTCCAAGTACTGTGGCAATAGAGAAACCGCACGCAGAGATGACCAGGACCCAGATGGAGAATTGGAAGACAATCACAACCCTCCTCTCCATGAGCCATGGCACGTCTCAACCACTGGTCTAGATGATGCTCTGATTAAATCTATTACAGTTTGCAAGTACAAGAAAGGTGATGGGTTGCTTGAAGTAACAGATTGCTCTGTTTGTCTAAGCGAGTTTCAAGAAGGTGAAAGTGTTAGACTCTTGCCCAAATGCAGCCATGCTTTTCATCTTCCTTGCATTGACACATGGCTCAAATCCCACTCCAATTGTCCTCTCTGTCGTGCGAGTATTTTCACCGTCAACCCTTCTGCTCCTCAGGTGGCTGTTCCAGTTATAGAACTTTCTTCAAGGAGTGAAACTTCAACAGAAAACCAACATGCAAACGAAAGATTGGCTTCTGGGAGAGATAATGGAAGGAGTTCCGTGGTGGAAGAAGAAATAGTGCACACTGGTGAAGCTCCAAAGCACGCAATGCGTGCTTACAGCGATTTGAGTAGTTTGCAGGGAAGGCACTGTATAATTGACATCAGAGATGAAGGGTATGATTCAATTAGAAGATCAGTCTCTATGGATCATTCATTTCAGAGTGGTTCATTTGCCGGTGTTCTGCATATGAATCAAGATCAAGACACATTAGCAGAAGAATGCTCTGCTGAAGCTGGTCCGTCCAAGAGATCCCGTGGAGAAAGTAGCAAGTCTAGTTGTAAAAGAAAGGTGTTACATTGTGTACTGAGTCCAATGGCTATGAAAAGATCGTTTTCCACTGGGAGATTCTCATTCACCAGGAACGCCAGAGGAAGACAGTGGGTTATCCCTGTTTGA 1092 0.4423 MGSLGNPRTWIPYMNTKDCSQGFCSLYCPQWCYVVNPPPPPYEFPEEDSSPNFSPLVITIIGILASAFLLVSYYTVISKYCGNRETARRDDQDPDGELEDNHNPPLHEPWHVSTTGLDDALIKSITVCKYKKGDGLLEVTDCSVCLSEFQEGESVRLLPKCSHAFHLPCIDTWLKSHSNCPLCRASIFTVNPSAPQVAVPVIELSSRSETSTENQHANERLASGRDNGRSSVVEEEIVHTGEAPKHAMRAYSDLSSLQGRHCIIDIRDEGYDSIRRSVSMDHSFQSGSFAGVLHMNQDQDTLAEECSAEAGPSKRSRGESSKSSCKRKVLHCVLSPMAMKRSFSTGRFSFTRNARGRQWVIPV 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00808 363 MobiDBLite consensus disorder prediction 303 322 - -
Bach10g00808 363 SUPERFAMILY RING/U-box 141 191 - -
Bach10g00808 363 CDD RING-H2_EL5-like 141 184 - -
Bach10g00808 363 ProSiteProfiles Zinc finger RING-type profile. 142 184 IPR001841 -
Bach10g00808 363 Pfam Ring finger domain 141 184 IPR001841 -
Bach10g00808 363 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 117 191 IPR013083 -
Bach10g00808 363 SMART ring_2 142 183 IPR001841 -
Bach10g00808 363 MobiDBLite consensus disorder prediction 86 111 - -
Bach10g00808 363 MobiDBLite consensus disorder prediction 86 106 - -
Bach10g00808 363 FunFam RING-H2 finger protein ATL54 117 190 - -
Bach10g00808 363 MobiDBLite consensus disorder prediction 205 230 - -
Bach10g00808 363 PANTHER RING-H2 FINGER PROTEIN ATL16 41 328 IPR044600 GO:0016567|GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00808 Bach-Chr10 5686291 5687382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00808 1 245 C3H Transcription Factor Family AT3G03550 48.162 5.91e-68 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00808 - - gmx:100792267 520.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00995 4 6670164 6671255 Bach10g00808 10 5686291 5687382 BWGD
Bach10g00808 10 5686291 5687382 Bach10g00808 10 5686291 5687382 ECH