Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00804 ATGGGGAAAAAGAAAACGAAGAAACCACAGGAAACTCCCGAAAGCAACGGAATTTCTGATTCCTCTGGTATCTTTAACACCTTGTTTGGTGAGGCACCGGAACAGCACACCTCTGGCTCGCTATTTTCCGATAAAAACTCCTTTCGGAGGAAGCCTCAAGAATCTGATTCAGGTCCGGGCTCAACTAAAGATACTGAAAGCCCTGATAATGGCGGCCCTGGGGACCACGATTCTGGTGAGCTGACGAAGAGGAAGAGGAAAAAAGAGAAAAGCTCTACTGTTGTTTCCGGCTCCGCCTTTGAAACTTCAGAGAAGAAACTAAAACTTGGTTCCCATGTAAGCCCTCGTCAGGGTCCTCAACCAGATTGGAATACGGAGGATAGCGAGGCCAAAGACGCTGATTTGGGTGCGCAGGGGCTTCCATCGTCGAAGAAAAAGAAGGCTAAAGCACGGGAAATGGTTTCTGAGTCAAATAACGTGTCAAATATTGGTGAGGGGGAAGACCCCGATTCGGGTTTGCGATCGAATGGAAAATATGAGGTTGTGAATGAGAACAAGGAGAAGACGGCAAAAAAGAGAAAGATGGATGAACTTGAGAAGGACTATGAGGCAAGGAAGTATGGAGCAGTTGAAGAAAAGGAAGATGAAGGTGAAGGCTTAGGAAACAAGACCGTTGGAAGCAAGAGAAAGACATTGGATAATCCAGCTGACATGCTGGTTTCTAATGAAGGGTTTGATGATGAGAATAAGCTTTTGAGAACTATTTTTGTCGGTAATTTGCCCCTTAAGACGAAAAAGAAGAGTTTGTTGAAGGAGTTTAAGAAATTTGGAGAGTTAGAATCTGTGAGGATTCGTTCTGTGCCAATATTGGATACCAAAAAGCCTAGAAAGGGAGCTATTCTATCGAATAAAATCAATGATTCTGCTGCTGATAGCTTTCATGCATATATTGTTTTTAAATCAGAGGAATCTGCACAGGCTTCTTTGTCCCATAACGTGGCGGTGGTTGGAGGAAATCACATTCGTGTTGATAGGGCATGCCCACCCCGCAAAAAACTTAAAGGGGAGAGTGCTCCACTTTATGATAACAAGAGAACTGTATTTGTGGGCAACCTCCCATTTGATGTAAAAGATGAAGAAGTATATCAGTTTTTTTTTGGTATAGCAAACCTGGAATCCAGTATTGAAGCTGTTAGAGTCGTTAGAGATCCTCATATTAATCTTGGAAAGGGCATTGCATATGTGCTGTTCAAAACCAGGGAAGCTGCTAATTATGTTATTAAGAAGCGAAACTTGAAGCTCCGAGACCGAGAACTGAGACTATCTCATGCCAGATCAGATGTCACGCAATCTAAAAGAGCAAACCCATCATCAGCACAGGGTCCTAATACCCCTTCGAAGAAATTGGCTATGTCTTCAACTTCAAGGTCTCCTTCAAGTAGCAATAACAAGACAAACAGAAAAACCAACATGTCATACCAGGGCGTGGTGGCTTCAAGGTCTCCTTCCAGCAGTAATAAGAGGGCAAAGGGAAAACCAAATATGTCTTACAAGGGTTTACGTGCAACCAAGATTGGTGTTCACAAGAGCAGCTTTAGCACACAGAGTGGAGGACAACCAACAGAGCGGAAGAAGAAAAGACCATCAGTTGCTGCTAGAAAGGCCAAGGCAGAATCGAAACAAGCAGGGTTCAAACGCAAGCTTTATAGCAGGACTCCAGATAACTCTCAGCCAAATAAGAAAGTTAAAAAGAATAGGTAG 1761 0.4338 MGKKKTKKPQETPESNGISDSSGIFNTLFGEAPEQHTSGSLFSDKNSFRRKPQESDSGPGSTKDTESPDNGGPGDHDSGELTKRKRKKEKSSTVVSGSAFETSEKKLKLGSHVSPRQGPQPDWNTEDSEAKDADLGAQGLPSSKKKKAKAREMVSESNNVSNIGEGEDPDSGLRSNGKYEVVNENKEKTAKKRKMDELEKDYEARKYGAVEEKEDEGEGLGNKTVGSKRKTLDNPADMLVSNEGFDDENKLLRTIFVGNLPLKTKKKSLLKEFKKFGELESVRIRSVPILDTKKPRKGAILSNKINDSAADSFHAYIVFKSEESAQASLSHNVAVVGGNHIRVDRACPPRKKLKGESAPLYDNKRTVFVGNLPFDVKDEEVYQFFFGIANLESSIEAVRVVRDPHINLGKGIAYVLFKTREAANYVIKKRNLKLRDRELRLSHARSDVTQSKRANPSSAQGPNTPSKKLAMSSTSRSPSSSNNKTNRKTNMSYQGVVASRSPSSSNKRAKGKPNMSYKGLRATKIGVHKSSFSTQSGGQPTERKKKRPSVAARKAKAESKQAGFKRKLYSRTPDNSQPNKKVKKNR 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00804 586 Gene3D - 249 353 IPR012677 -
Bach10g00804 586 MobiDBLite consensus disorder prediction 210 229 - -
Bach10g00804 586 CDD RRM2_RBM34 366 442 IPR034221 -
Bach10g00804 586 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 345 509 - -
Bach10g00804 586 MobiDBLite consensus disorder prediction 1 182 - -
Bach10g00804 586 SUPERFAMILY RNA-binding domain, RBD 247 354 IPR035979 GO:0003676
Bach10g00804 586 Gene3D - 354 464 IPR012677 -
Bach10g00804 586 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 253 348 IPR000504 GO:0003723
Bach10g00804 586 MobiDBLite consensus disorder prediction 540 567 - -
Bach10g00804 586 MobiDBLite consensus disorder prediction 448 511 - -
Bach10g00804 586 MobiDBLite consensus disorder prediction 69 87 - -
Bach10g00804 586 SUPERFAMILY RNA-binding domain, RBD 361 461 IPR035979 GO:0003676
Bach10g00804 586 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 365 446 IPR000504 GO:0003723
Bach10g00804 586 MobiDBLite consensus disorder prediction 53 68 - -
Bach10g00804 586 MobiDBLite consensus disorder prediction 443 586 - -
Bach10g00804 586 CDD RRM1_RBM34 253 344 - -
Bach10g00804 586 MobiDBLite consensus disorder prediction 12 46 - -
Bach10g00804 586 SMART rrm1_1 366 442 IPR000504 GO:0003723
Bach10g00804 586 SMART rrm1_1 254 344 IPR000504 GO:0003723
Bach10g00804 586 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 367 439 IPR000504 GO:0003723
Bach10g00804 586 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 255 297 IPR000504 GO:0003723
Bach10g00804 586 Coils Coil 181 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00804 Bach-Chr10 5660633 5663709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00804 232 445 Eukaryotic Initiation Factors Gene Family AT1G22760 26.106 5.15e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00804 K14837 - qsa:O6P43_033336 579.711