Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00788 ATGGTGGAAGGAGGGGTTTGTTTATCTAAAGAAGCTAGAAATGGGTTAGAATTTTTGAAGCGTAAAAGGCTTCAGCGAACAAAAGCTGTTAGTGCCACAGAGACTGTGAATGTTGCTAACATGATGACCAGAAGTGGAGGAGATGCACTAAGAGCTTCGTCATCATGTGGTGTGAGGTTGCATGGTAATGCAGATGTTTTTTCCAAGCGGAAGGTCGATAAGTTCGGCACAAGTGATCTAGAATGGACTGAAAATATTCCAGAGTGTCCTATGTATTCTCCAACAAAGGACGAATTCGAGGATCCCTTGGTATATTTGCAAAAGATAGCTCCCGAAGCTTCAAAATATGGTATATGCAAGATAATTTCCCCTGTGAGTGCTAATGTTCCTGCTGGGGTTGTTTTGATGAAGGAGAAAGTCGGATTCAAGTTTACAACCAGGGTACAGCCACTTCGTCTTGCTGAATGGGACAGTGAAGACAAAGTGACGTTTTTCATGAGTGGAAGAAATTATACATTTCGTGATTTTGAAAAAATGGCGAACAAGGTTTTCACGCGTAGATATTGCAGTGCTGGTTGTCTTCCTGCGGCATACTTAGAAAAAGAGTTTTGGCATGAAATTGGTTGTGGAAAGATGGATACTGTTGAATATGCATGTGACATTGATGGTAGTGCCTTTTCAAATTCTCCCACTGATCAGCTTGGAAACAGCAGATGGAATTTGAAGAAACTTTCACGGCTGCCAAAGTCTATTTTGCGTCTCTTGGAAACAGCAATTCCGGGAGTAACAGAACCTATGCTGTACATTGGAATGTTGTTTAGTATGTTTGCTTGGCATGTGGAGGATCATTATTTGTACAGTATTAATTATCATCATTGTGGAGCATCAAAAACTTGGTACGGCATTCCAGGGCATGCGGCTTTGGATTTTGAAAGGGTGGTTAGAGAACATGTATATACTCATGATATTTTGTCCAGTGAGGGGGAAGACGGTGCCTTTGATGTTCTTCTGGGGAAAACAACTCTGTTTCCTCCAAATATTTTGTTGGAACATGATGTTCCTGTCTACAAGGCGGTCCAAAAGCCAGGGGAGTTTATTGTTACCTTCCCAAGAGCTTATCATGCCGGATTCAGTCATGGTTTTAACTGTGGAGAAGCTGTCAACTTTGCCATTGGCAATTGGTTTCCCTTTGGGGCTATTGCTAGCAGGCGGTACGCATTTCTTAACAGGATGCCTTTGCTGCCTCACGAAGAACTTTTGTCCAAAGAAGCAATGATTCTCTATTCGAGCTTAGAATTGGAAGATGCAGACTTTTCCTCTGCTGACTTATCATTTCATACTTGCATTAAGATTGCTTTTGTTAATTTGATGCGCTTTCAGCATTGTGCTCGATGGTTCCTTTTGAAATCAAGATCATGGACAAGTGTTTCTGCGCATTCTCACGGCACTATTCTCTGTAGCCTCTGCAAACGTGATTGCTATGTAGCTTATATTGATTGTGACTGTCACATGCATCCAATGTGCCTTCGCCATGATTTTGAACCTCTTGACTTCAGCTGTGGAAGCAAGCACACTCTTTATTTGAGGGAGGATATTACTGATATGGAAGCTGCAGCCAAGCGGTTTGAGAAAGAAGATGGAATATTGGATCAGATTCTTAAGCAAATCAAGGGTGATGAAAACATGTATACATATCCTTTATTAAATATGTTTCAGAGAGCTGAAGCAAATGGGTACACTCCTTATTGTGAGATAAAAGGGGATACTGTTATGGAATTTTATTCAACCCCAGATCAGTCAACAAATAATCTAGAGCATGTTCCACAAAGTCAATTTATTTTGAGACATTGCTCAGAAGATCTAACATCTCAAGTGTCTGAGGTTCCTTTCTCTTCTGCTGCATTGACTCTTTGTTCTCTTTCTGAACCTCTTGAGGTCTCTTCTGCTCCCAAAAATGACGAGGAGCGTGCTAACTTTGATTTAGGCATTATTGATTCTGAAGTGTTCTGTGGAAGGGTATTCAATAGTGCATGTGAATCTTCACTATCCCCTGCACAGTGCCATGAAAGCTCAAGTAAACCTCAGGGTGGTCTCCATAGATTAGATATGAAGCCTGCTGTGGATAACCAGAGTGATGATTCTGACTCAGAGATATTTAGGGTAAAGCGGCCTTCTTCCCTGAAGGCCCAGAAAAGAAATATGAATGACGCCATGTCTTTAAAGCATTCTGATCATCAGGAACTGAAACGATTGAAGAAAGTCATTCATGAAGGAAGAAGTGTGCAACAAATGGGTAGCAACAGAAGTAATGAAAGAAGCTACAAATTTAGTCACCCTATTAATCATAAAGTTGATGAGGAAAGTTGCTTGAAGGATAGATTTTCAAGGGGAAATAGTGTTCCCATTTCTATTAGGTATAAAAAGTTAGGGAATGAAGTTGTAAGTAGACAACGAGATCACCACAGGAACGATAGATTGCAGCATATTAGGGAACCACCTCCCATAGAATTTGGGCCTAAGCACCTTAAAGTCCGTGGTCCTTCATTTATGGGCTTAGAGAGCAGATGGAGTTGA 2574 0.4103 MVEGGVCLSKEARNGLEFLKRKRLQRTKAVSATETVNVANMMTRSGGDALRASSSCGVRLHGNADVFSKRKVDKFGTSDLEWTENIPECPMYSPTKDEFEDPLVYLQKIAPEASKYGICKIISPVSANVPAGVVLMKEKVGFKFTTRVQPLRLAEWDSEDKVTFFMSGRNYTFRDFEKMANKVFTRRYCSAGCLPAAYLEKEFWHEIGCGKMDTVEYACDIDGSAFSNSPTDQLGNSRWNLKKLSRLPKSILRLLETAIPGVTEPMLYIGMLFSMFAWHVEDHYLYSINYHHCGASKTWYGIPGHAALDFERVVREHVYTHDILSSEGEDGAFDVLLGKTTLFPPNILLEHDVPVYKAVQKPGEFIVTFPRAYHAGFSHGFNCGEAVNFAIGNWFPFGAIASRRYAFLNRMPLLPHEELLSKEAMILYSSLELEDADFSSADLSFHTCIKIAFVNLMRFQHCARWFLLKSRSWTSVSAHSHGTILCSLCKRDCYVAYIDCDCHMHPMCLRHDFEPLDFSCGSKHTLYLREDITDMEAAAKRFEKEDGILDQILKQIKGDENMYTYPLLNMFQRAEANGYTPYCEIKGDTVMEFYSTPDQSTNNLEHVPQSQFILRHCSEDLTSQVSEVPFSSAALTLCSLSEPLEVSSAPKNDEERANFDLGIIDSEVFCGRVFNSACESSLSPAQCHESSSKPQGGLHRLDMKPAVDNQSDDSDSEIFRVKRPSSLKAQKRNMNDAMSLKHSDHQELKRLKKVIHEGRSVQQMGSNRSNERSYKFSHPINHKVDEESCLKDRFSRGNSVPISIRYKKLGNEVVSRQRDHHRNDRLQHIREPPPIEFGPKHLKVRGPSFMGLESRWS 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00788 857 Pfam jmjN domain 90 122 IPR003349 -
Bach10g00788 857 ProSiteProfiles JmjN domain profile. 89 130 IPR003349 -
Bach10g00788 857 SMART JmjN_1 88 129 IPR003349 -
Bach10g00788 857 Pfam JmjC domain, hydroxylase 266 389 IPR003347 -
Bach10g00788 857 SMART cupin_9 233 406 IPR003347 -
Bach10g00788 857 Gene3D Cupin 89 444 - -
Bach10g00788 857 FunFam Lysine-specific demethylase isoform A 84 433 - -
Bach10g00788 857 Pfam C5HC2 zinc finger 486 537 IPR004198 -
Bach10g00788 857 SUPERFAMILY Clavaminate synthase-like 167 421 - -
Bach10g00788 857 PANTHER LYSINE-SPECIFIC DEMETHYLASE 81 774 - -
Bach10g00788 857 MobiDBLite consensus disorder prediction 705 720 - -
Bach10g00788 857 ProSiteProfiles JmjC domain profile. 236 406 IPR003347 -
Bach10g00788 857 MobiDBLite consensus disorder prediction 684 720 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00788 Bach-Chr10 5570439 5576376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00788 85 556 JUMONJI Transcription Factor Family AT2G34880 31.330 2.58e-61 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Bach10g00788 JmjC 1.4e-38 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00788 - - gmx:100798611 1372.45