Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00751 ATGGCCGCAAATCTCACGGAAGGAGCAATAACGTTTATGTGCAGGGACGATTTTTCCTCGGAGGAGTTGAAACCGGTGCTCCAAGTAATCGACTTGAAGCTTGTGCAAGCCCAGCAGCATAGCGCCACAGAGAGGTATCGGCTTGTGCTTTCCGATGGTTCGCATTATCAGCAAGGGATGCTCGCCACTCAAAAGAATGAATTAGTTCATGCTGGGAGTTTGCAGAAAGGCTCCGTGGTTAGATTAACACAGTTTATCTGTAATGTTGTCCAGAATCGCAAGATTATTATCATCATTGAGCTGGATGTGGTTCTTGAAAAATGTGATCTGATTGGAGAACCTGCACCAGTACCAAGAACTGCTCCTACGCAATCTTCCACTGGCCAATCAGGAGCAATTGCTGGAAATCCCCAGTCTATGAGCAACACTTCACTTAGAGCAAACTTGGCTGGAGCCACTGGGCCATCTCTAGATCCTCCAAAAATGAATCATCCTGCCAATAATGCTTATCCTAGTGGTTCTGACTCTATAAGATATGGGGCATCAATTGTAGCTCCTACTTTTCCAAAATCAGAGCCTGGAGACTCCTTACCTAAGCCAATGCCATTCAGTGGATCATATGGTGACCAGAACACGGGTTTTCGCAATCCCCTGTCAGAACCTTCAAGGCCATTGCAAAGTCGTCCACCACAGGCAATGTATAGACAGCCATCTCCAGTATACCCTAACAGAGCACCAATAACAAGAAATGAAGCCCTGCCAAGAATAATTCCAATTGCTGCATTGAATCCATACCAGAATATGTGGACAATCAAGGTTAGAGTAACAGCAAAGGGAGAACTCAGGCTCTATAATAATCCCCGAGGTGAGGGAAAAGTGTTTTCTTTTGATCTTCTTGACTCTGAAGGTGGAGAAATTCGGGCTACTTGCTTTAATGCTGTGGCCGATCAGTTCTATCATCAAGTTGAAGTTGGTAAAGTCTATCTGATTTCCAGGGGAAGTATAAAGCCAGCTCAAAAGAACTTTAATCACCTTCGTAATGATCAAGAACTGACCCTTGATATGACATCATTTATACAGCCGTGCCCTGATGATGACAACTCAATTCCGAAACAACTGTTCCAATTCCGTCCCATTAGTGAGGTTGAAAGTTTGGAAAATAATAGTGTTGTTGATGTGATTGGTGTGGTGTCTTCTGTTAGTCCTACAGCTTCAATCATGAGAAAAAATGGTACTGAAACTCAGAAAAGGGTCGTCCAGTTGAAAGATATGTCTTGCCGATGTGTTGAATTAACTCTCTGGGGAAATTTTTGCAATGCAGAAGGACAAAGGCTGCAAAGTATGTGTGATTCTGGGGCATTTCCGATTTTGGCTGTGAAAGCTGCCAGAGTAAACGATTTCAATGGGAAGGCTGTTGGGACCATAGCCTCTAGTCAACTATTTATAGACCCTGATTCTCCAGAGGCTTATAGGCTGAAAGAATGGTTTGCGAGGGAAGGAAGGAACATTCCAACTGTTTCAGTTTCCAGAGAAGCATTTAATATTGGTAGTACAAATATACGAAAGACTATATCTCAGATTAAAGATGAGAAGTTAGGGACTTCAGAGAAGCCTGATTGGATCACTGTCTGTGCAAGTGTTTCTTTCATTAAGGTGGATAATTTCTCCTACATGGCCTGTCCTATCATGATAGGGGATAGGCAATGCAACAAAAAAGTGACTGATAATGGAGATGGGAAATGGCGGTGTGATAGGTGTGACCAGACTATTGATAATTGTGACTATAGGTATATACTACAACTCCAGATACAAGACCATACGGGCTTTACATGGGTTACTACCTTTCAGGAGTGTGGTGAGGAGATCATGGGTATTCCTGCCAAAGATCTATATTATTTGAAATACGAAGAGGATGACGATGAAAAATTTGCAGAAATAATCCGTAAGGTTCTCTTTGGTAAATATATATTCAAGTTGAAAGTAAAGGAGGAAACATTCAGTGATGAACATCGTGTAAAGTCAACAATAGTCAAAGTAGACAAGGCGAACTTCTCATCTGAATCTAGATTTCTTTTGGACTTGATTGATAAGCTTAAAGCTGATAGGGCAGAAGACATCAATCACAACTCCACAATCAATAACGCTGGAATCGGGAATGTTGGAAGTGGACAAAATTTCCCACCAGTTTATGATCATGGGGGTCCGTATGCCAGTAGAGAATATGCGACAACAACAAATCAAGGAGTTCAGTATGGAAACCAAGATAATGGTTATTTTGCTTCCACCGGGGTTTCTGGTTCATATAAGTCTTGTAACAACTGTGGAGGCTCTGGTCATAGCTCTGCAAATTGCCCAAATTTTATGAGTGTATCTGGCCGGTCTACTGGAGTACCGTTTGCAAACAGGGTATCTGCTGGGTCAAACGGTGGTGCTGCCCCTGGTGAGTGCTTTAAATGCCATCAATCAGGTCATTGGGCAAGAGATTGTCCAGGTTTCAATGTAGCCCCACCAGCTTATGGAAGCACTAGTGGATTGCCGGCAAGGAATGGGGTTGCTCAAAAGTAA 2565 0.4277 MAANLTEGAITFMCRDDFSSEELKPVLQVIDLKLVQAQQHSATERYRLVLSDGSHYQQGMLATQKNELVHAGSLQKGSVVRLTQFICNVVQNRKIIIIIELDVVLEKCDLIGEPAPVPRTAPTQSSTGQSGAIAGNPQSMSNTSLRANLAGATGPSLDPPKMNHPANNAYPSGSDSIRYGASIVAPTFPKSEPGDSLPKPMPFSGSYGDQNTGFRNPLSEPSRPLQSRPPQAMYRQPSPVYPNRAPITRNEALPRIIPIAALNPYQNMWTIKVRVTAKGELRLYNNPRGEGKVFSFDLLDSEGGEIRATCFNAVADQFYHQVEVGKVYLISRGSIKPAQKNFNHLRNDQELTLDMTSFIQPCPDDDNSIPKQLFQFRPISEVESLENNSVVDVIGVVSSVSPTASIMRKNGTETQKRVVQLKDMSCRCVELTLWGNFCNAEGQRLQSMCDSGAFPILAVKAARVNDFNGKAVGTIASSQLFIDPDSPEAYRLKEWFAREGRNIPTVSVSREAFNIGSTNIRKTISQIKDEKLGTSEKPDWITVCASVSFIKVDNFSYMACPIMIGDRQCNKKVTDNGDGKWRCDRCDQTIDNCDYRYILQLQIQDHTGFTWVTTFQECGEEIMGIPAKDLYYLKYEEDDDEKFAEIIRKVLFGKYIFKLKVKEETFSDEHRVKSTIVKVDKANFSSESRFLLDLIDKLKADRAEDINHNSTINNAGIGNVGSGQNFPPVYDHGGPYASREYATTTNQGVQYGNQDNGYFASTGVSGSYKSCNNCGGSGHSSANCPNFMSVSGRSTGVPFANRVSAGSNGGAAPGECFKCHQSGHWARDCPGFNVAPPAYGSTSGLPARNGVAQK 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00751 854 ProSiteProfiles Zinc finger CCHC-type profile. 771 786 IPR001878 GO:0003676|GO:0008270
Bach10g00751 854 MobiDBLite consensus disorder prediction 188 245 - -
Bach10g00751 854 MobiDBLite consensus disorder prediction 116 173 - -
Bach10g00751 854 ProSiteProfiles Zinc finger CCHC-type profile. 816 830 IPR001878 GO:0003676|GO:0008270
Bach10g00751 854 Pfam Zinc knuckle 815 830 IPR001878 GO:0003676|GO:0008270
Bach10g00751 854 Pfam Zinc knuckle 770 786 IPR001878 GO:0003676|GO:0008270
Bach10g00751 854 Pfam Replication protein A OB domain 379 483 IPR031657 -
Bach10g00751 854 CDD RPA1_DBD_A 258 360 - -
Bach10g00751 854 FunFam Replication protein A subunit 4 118 - -
Bach10g00751 854 SUPERFAMILY Nucleic acid-binding proteins 374 503 IPR012340 -
Bach10g00751 854 Pfam Replication factor-A protein 1, N-terminal domain 5 105 IPR007199 GO:0003677|GO:0005634|GO:0006260
Bach10g00751 854 Gene3D - 368 507 IPR012340 -
Bach10g00751 854 FunFam Replication protein A subunit 368 506 - -
Bach10g00751 854 Pfam Replication factor-A C terminal domain 540 691 IPR013955 -
Bach10g00751 854 CDD RPA1N 8 104 IPR007199 GO:0003677|GO:0005634|GO:0006260
Bach10g00751 854 PANTHER REPLICATION FACTOR A 1, RFA1 269 688 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Bach10g00751 854 FunFam Replication protein A subunit 255 365 - -
Bach10g00751 854 NCBIfam replication factor-a protein 1 (rpa1) 231 697 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Bach10g00751 854 MobiDBLite consensus disorder prediction 119 150 - -
Bach10g00751 854 SUPERFAMILY Retrovirus zinc finger-like domains 803 832 IPR036875 GO:0003676|GO:0008270
Bach10g00751 854 Gene3D - 508 698 IPR012340 -
Bach10g00751 854 MobiDBLite consensus disorder prediction 205 233 - -
Bach10g00751 854 Gene3D - 3 118 IPR012340 -
Bach10g00751 854 CDD RPA1_DBD_C 524 697 IPR047192 -
Bach10g00751 854 FunFam Replication protein A subunit 507 698 - -
Bach10g00751 854 Gene3D - 255 365 IPR012340 -
Bach10g00751 854 Gene3D - 743 835 - -
Bach10g00751 854 Pfam OB-fold nucleic acid binding domain 269 353 IPR004365 GO:0003676
Bach10g00751 854 SUPERFAMILY Nucleic acid-binding proteins 256 369 IPR012340 -
Bach10g00751 854 SMART c2hcfinal6 815 831 IPR001878 GO:0003676|GO:0008270
Bach10g00751 854 SMART c2hcfinal6 770 786 IPR001878 GO:0003676|GO:0008270
Bach10g00751 854 SUPERFAMILY Nucleic acid-binding proteins 521 698 IPR012340 -
Bach10g00751 854 CDD RPA1_DBD_B 390 496 - -
Bach10g00751 854 SUPERFAMILY Nucleic acid-binding proteins 1 112 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00751 Bach-Chr10 5322200 5325214 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00751 1 789 Core DNA Replication Machinery Family AT5G45400 51.361 0.0 843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00751 K07466 - qsa:O6P43_033421 1159.44