Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00747 ATGGAGTCCAGTGAGCAAGAGGACACGTCGGTTCGAGAGGTCTGTGCAAATGGAAGTTGCATGAAAACAGCAGAAGTCGAAGCGAAGCTAGATGAAGGAAATATTCTAGAGGCTGAAGCTTCTTTACGAGAGGGGTTATCACTCAACTCTGAGGAAGCACGAGCTCTTCTTGGGAAGTTGGAGTATCTAAGGGGTAATGTAGAAGGTGCTCTTCGTGTGTTTGAGGGGATCGACCTCCAAGCTGCCATACAGCGTTTACAACCTACCCTTTCCGAAAAACCATCCAACACCAAGAAAGGCCGCACACAAAGCGAATCACCTCCCTCAGTCTCACAACATGCTGCTAGTTTGGTCCTTGAAGCCATCTACTTAAAAGCCAAGTCTCTACAGAAGCTGGGGAAGTTTACTGAAGCTGCTCATCAATGCAAAAGTGTGCTTGATTCTGTGGAGAAGATATTTTGTCAGGGTATACCTGATGTTCAAGTGGATAATAAATTGCAAGATATAGTTAGCCATGCTGTAGAGCTACTTCCAGAGCTTTCAAAGCAGGCCGGTAGTTATGATGAAGCTGTATCTGCTTATAGGCGTGCCCTTCTTAGTCAATGGAACCTTGATAATGATTGCTGTGCTAGAATTCAGAAAGGGTTTGTTGTGTTTTTGCTTTACAGTGGGGTGGAGGCTAGTGCACCTAGTTTAGCAGTTCAGATAGAGGGGTCCTATGTACCTAAAAATAATCTGGAAGAAGCAATTCTTCTTCTGATGATTCTTATTAGGAAGTTTTGTCTTGGTAAGACCAAATGGGATCCTTCAGTGATGGAACACCTGAATTTTGCACTCTCTATTTGTAGCCAAACTTGTGTTTTAGCAAAGCAACTGGAAGAGTTAATGCCTGGTGTATATCATCGCATTGACCGTTGGAATTCTTTAGCTTTATGTCATAGTGGAGCTGGACAAAGCAAGAGTGCTTTGAATCTACTGAGGAAGTCTTTGCACAAACATGAACGACCAGATGACCTCATGTCGTTATTATTGGCTGCCAGGATCTGCAGTGAGGATCCGTATCTTGCTGCTGAGGGAGTGGGATATGCAGAGAGGGCCATTAATAATTGTCAGGGCTTGCATGAGCATTTGAAAGGTGTGGGTATAAGAATGTTGGGACTTTGTCTAGGAAAACAAGCTAAGGTTGCTTCCTTTGACTTTGAGAGATCTAATCTTCAGTCTAAAGCTCTGAAATCACTGGAGGAGGCAATTCGATTGGAACAAAACAATCCTGATCTGATTTTTGAGTTGGCTGTTCAATATGCAGAGCACCGGAATTTGACTGCTTCTTTGCGGTATGCAAAGCAGTTCTTTGATGAAACAGGTGGCTCTATATTGAAAGGTTGGAGGCTGCTTGCTCTGGTTTTGTCTGCTCAACAAAGATTTTCAGAGGCTGAAGTGGTGACAGATGCTGCATTGGATGAGACTGCAAAATGGGAGCAAGGGCCACTGCTTAGGCTGAAAGCAAAACTGAAGATTTCCCAGTCACGACCAATGGAAGCTATTGAAACATTCCGCTACCTCCTAGCATTGGTTCAAGCCCAGAGGAAATCCTTTGGGCCTCTCAGAAATACTTCACAGGTTGAGGATGATAAAGTAAATGAATTTGATGTTTGGCATGGTCTGGCAAATTTATATGCAAGCCTCTCTCATTGGAAGGATGCTGAAATATGTTTGCAAAAGGCCAGAGAGTTGAAGCAGTATTCGGCGGCAGCACTCCACACAGAAGGTGTTGTGGCTGAAGGACGAGGACAACATCAGGAAGCTGTTGCTGCTTATATTAATGCTGCGCTATTTGAACACAGCCATGTTTCAACTAAGAATTCATTAGGTGCTTTGTTGTCTAGGAGGGGTTCACAGGGTTTGCCTGTGGCAAGAAGCTTACTTTGTGATGCACTAAGAATAGATCCCACCAACCGCATGGCTTGGTATTTTTTGGGAATGGTTCACAAGGATGATGGCCGAATAGGCGATGCTGCTGACTGCTTTCAAGCAGCTTCCATGCTTGAAGAATCTGATCCTATTGAAAGTTTCAGCACTATTCTTTGA 2088 0.4401 MESSEQEDTSVREVCANGSCMKTAEVEAKLDEGNILEAEASLREGLSLNSEEARALLGKLEYLRGNVEGALRVFEGIDLQAAIQRLQPTLSEKPSNTKKGRTQSESPPSVSQHAASLVLEAIYLKAKSLQKLGKFTEAAHQCKSVLDSVEKIFCQGIPDVQVDNKLQDIVSHAVELLPELSKQAGSYDEAVSAYRRALLSQWNLDNDCCARIQKGFVVFLLYSGVEASAPSLAVQIEGSYVPKNNLEEAILLLMILIRKFCLGKTKWDPSVMEHLNFALSICSQTCVLAKQLEELMPGVYHRIDRWNSLALCHSGAGQSKSALNLLRKSLHKHERPDDLMSLLLAARICSEDPYLAAEGVGYAERAINNCQGLHEHLKGVGIRMLGLCLGKQAKVASFDFERSNLQSKALKSLEEAIRLEQNNPDLIFELAVQYAEHRNLTASLRYAKQFFDETGGSILKGWRLLALVLSAQQRFSEAEVVTDAALDETAKWEQGPLLRLKAKLKISQSRPMEAIETFRYLLALVQAQRKSFGPLRNTSQVEDDKVNEFDVWHGLANLYASLSHWKDAEICLQKARELKQYSAAALHTEGVVAEGRGQHQEAVAAYINAALFEHSHVSTKNSLGALLSRRGSQGLPVARSLLCDALRIDPTNRMAWYFLGMVHKDDGRIGDAADCFQAASMLEESDPIESFSTIL 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00747 695 PANTHER PROTEIN NPG1 5 692 IPR043376 -
Bach10g00747 695 SUPERFAMILY TPR-like 32 451 IPR011990 GO:0005515
Bach10g00747 695 MobiDBLite consensus disorder prediction 88 110 - -
Bach10g00747 695 Gene3D Tetratricopeptide repeat domain 239 532 IPR011990 GO:0005515
Bach10g00747 695 Gene3D Tetratricopeptide repeat domain 536 618 IPR011990 GO:0005515
Bach10g00747 695 FunFam NPG1 540 689 - -
Bach10g00747 695 SUPERFAMILY TPR-like 404 679 IPR011990 GO:0005515
Bach10g00747 695 Gene3D Tetratricopeptide repeat domain 619 691 IPR011990 GO:0005515
Bach10g00747 695 Gene3D Tetratricopeptide repeat domain 22 203 IPR011990 GO:0005515
Bach10g00747 695 SMART tpr_5 583 616 IPR019734 GO:0005515
Bach10g00747 695 SMART tpr_5 459 492 IPR019734 GO:0005515
Bach10g00747 695 SMART tpr_5 549 582 IPR019734 GO:0005515
Bach10g00747 695 SMART tpr_5 653 686 IPR019734 GO:0005515
Bach10g00747 695 SMART tpr_5 303 336 IPR019734 GO:0005515
Bach10g00747 695 SMART tpr_5 119 152 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00747 Bach-Chr10 5301198 5305256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00747 3 695 Calmodulin-binding Proteins AT2G43040 76.614 0.0 1045
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00747 K21843 - qsa:O6P43_033425 1092.8