Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00741 ATGCCCAGTCAAGACGATGATTCTTGTCTCTCCCGTGGTCAAATAGCTTCTATATTAATTGCTATGGCTTCAGCTGCTTTTCTGCTCATAATTTACCATCTTATTGGTATTTGTTTGTGCAACAAAAGCATCACTAATCAAAACCCAGAACAAGCACAAAGCCATCAGCATCTAGTTCTCATAACACCGTCGGAAACGCCGAGCCCAGTCGCCAGTTTGATTCCATCCCACAAATACAAAAAGAAGAAGGAAGTGGCAAGTGAAGATGATACATGTGCTGTGTGCTTGGGAGAATTTGAGGAGGGTGATGAATTGCGGACTTTGCCGGAGTGCATGCACTCTTATCACGTACCATGTATAGATAAGTGGTTCCATTTGCATTCAAGTTGCCCTATTTGTCGTACGCTTGCCATGCCTTCACCGGTGACTCACCCTCGTGTGCCGGACTTCGGATCCGGTGAAGTTAACAGACATCACAATTTAAGGATGTTGCAAAGTGTTGTTGTCCATGATAGAATAGGGTGA 525 0.4438 MPSQDDDSCLSRGQIASILIAMASAAFLLIIYHLIGICLCNKSITNQNPEQAQSHQHLVLITPSETPSPVASLIPSHKYKKKKEVASEDDTCAVCLGEFEEGDELRTLPECMHSYHVPCIDKWFHLHSSCPICRTLAMPSPVTHPRVPDFGSGEVNRHHNLRMLQSVVVHDRIG 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00741 174 CDD RING-H2_EL5-like 92 134 - -
Bach10g00741 174 SMART ring_2 92 133 IPR001841 -
Bach10g00741 174 ProSiteProfiles Zinc finger RING-type profile. 92 134 IPR001841 -
Bach10g00741 174 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 45 138 IPR013083 -
Bach10g00741 174 Pfam Ring finger domain 90 134 IPR001841 -
Bach10g00741 174 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 16 135 IPR044675 -
Bach10g00741 174 SUPERFAMILY RING/U-box 80 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00741 Bach-Chr10 5276684 5277208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00741 15 135 C3H Transcription Factor Family AT1G04360 35.075 6.30e-20 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00741 - - lja:Lj0g3v0111029.1 148.288