Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00696 ATGGGTGGAGACAGTGCCGTTGATGATGCTACCGAATCGAAGAGTGGTAATGGAGTAACAATCAACATTCGTTGCTCGAATGGGTCGAAATTCTCGGTTCAGATTACTCTCGAATCAACTGTCGGATCGTTTAAGGAAGTTGTCGCTCGGAACTGCGACATCCCTACCGATCAGCAGAGATTGATTTACAAGGGGCGGATCCTAAAGGACGATCAAACCCTGCTAAGCTACGGCTTGGAGGCAGATCACACTATCCATTTGGTTCGTGGTTTTACCCCAGCTGCATCAGGCAATTCAACCGGTGGAACCCCTACAGGTGGTACAAATACTACAACAAACAATGCGAGAAGTACTGGCTCCGATGAAGGTGGGGGTTTAGGAGGATCTGGTTTTGGAGCCTCATTGTTTCCTGGACTCGGCATTAATGGGCTGGGTGGCAGTGGTGGCTTGTTTGGAGCTGGGCTTCAAGATCTTGATCAAATGCAGCATCCACTACTTCCAAACCCCAATGTAGTCAGAGAATTAATGAACTCACCTGCTATTCAGAATATAATAAATAATCCTGAGATAATGAGGAATCTTTTGATGAATAACCCACAGATGCGTGAGCTAATGGATCGAAATCCTGAGCTAGCACACATACTCAACGATCCCAGTACTCTCCGCCAGACACTTGAAGCTACAAGAAACCCTGAACTCATGCGTGAAATGATGCGAAACACGGACAGAGCAATGAGCAATATTGAATCTTCTCCTGAGGGATTTAACATGCTAAGGCGCATGTATGAAAATGTTCAAGAACCATTCTTAAATGCCACTACAATGGCTGGTAATGCAGGAAATGAATCTAACCCCTTTGCTGCACTTCTGGGGACTCAAGGTGGCCAAGCCCGAGACCAATCGACTAACCCATCTACTACTGGTTCAGAAGCAACAGGTGGTTCTCCCTCCCCCAATACTAACCCACTTCCTAATCCTTGGGGCTCAACTGGAGCAGCTGGAGGTGCCCAAAATAACACAGGGTCAACTACAGGTGGGGATGCTAGGCAGCAGGCACCCGCTGGCTTGGGAGGACTTGGTCTCCCACATCTTGAGGGCATGTTGGGTGCTATGCCAGATCCCACTTTAGTGAACCAATTAATGCAAAATCCAGCTATTTCTCAAATGATGCAGAGTATTCTCTCAAATCCACAGGCTATGAATCAGGTTCTTGGTGTCAATCCTGATCAGCGTGGCATGCCTGATTTAAATTCTCATGTCAGAGAAATGATGCAAAACCCAGAGTTCCTTCGCCTGTTTTCTTCACCTGAGACAATGCAGCAACTCTTGTCTTTTCAGCAAACTCTTCTATCCCAACTTGGTCGGCAACAATCAACACAGGAATCTGTTCAAACTGGCGGAGGCACTGGATCAATGAACAACACGGGGTTGGAAATGTTGATGAACATGTTTGGTGGGCTTGGAGCTGGCAGCCTAGCCGTCCCTAACAGATCAGATGAGCCACCGGAACAATTGTATGCCACCCAGCTTTCGCAGCTTCAAGAGATGGGTTTCTTTGACACGCAAGAGAATTTAAGGGCCCTTATTGCTACCTCAGGGAATGTTCATGCTGCGGTTGAACGGCTTTTGGGGAATACTGGTCAGTAG 1647 0.4736 MGGDSAVDDATESKSGNGVTINIRCSNGSKFSVQITLESTVGSFKEVVARNCDIPTDQQRLIYKGRILKDDQTLLSYGLEADHTIHLVRGFTPAASGNSTGGTPTGGTNTTTNNARSTGSDEGGGLGGSGFGASLFPGLGINGLGGSGGLFGAGLQDLDQMQHPLLPNPNVVRELMNSPAIQNIINNPEIMRNLLMNNPQMRELMDRNPELAHILNDPSTLRQTLEATRNPELMREMMRNTDRAMSNIESSPEGFNMLRRMYENVQEPFLNATTMAGNAGNESNPFAALLGTQGGQARDQSTNPSTTGSEATGGSPSPNTNPLPNPWGSTGAAGGAQNNTGSTTGGDARQQAPAGLGGLGLPHLEGMLGAMPDPTLVNQLMQNPAISQMMQSILSNPQAMNQVLGVNPDQRGMPDLNSHVREMMQNPEFLRLFSSPETMQQLLSFQQTLLSQLGRQQSTQESVQTGGGTGSMNNTGLEMLMNMFGGLGAGSLAVPNRSDEPPEQLYATQLSQLQEMGFFDTQENLRALIATSGNVHAAVERLLGNTGQ 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00696 548 CDD UBA_PLICs 506 544 - -
Bach10g00696 548 PANTHER UBIQUILIN 14 543 IPR015496 -
Bach10g00696 548 SMART ubq_7 19 90 IPR000626 GO:0005515
Bach10g00696 548 SMART CBM 148 185 IPR006636 -
Bach10g00696 548 SMART CBM 352 403 IPR006636 -
Bach10g00696 548 SMART CBM 198 237 IPR006636 -
Bach10g00696 548 SMART CBM 407 442 IPR006636 -
Bach10g00696 548 CDD Ubl_Dsk2p_like 19 91 - -
Bach10g00696 548 Gene3D - 488 548 - -
Bach10g00696 548 SUPERFAMILY Ubiquitin-like 11 107 IPR029071 -
Bach10g00696 548 SUPERFAMILY UBA-like 502 544 IPR009060 GO:0005515
Bach10g00696 548 MobiDBLite consensus disorder prediction 93 126 - -
Bach10g00696 548 MobiDBLite consensus disorder prediction 274 360 - -
Bach10g00696 548 MobiDBLite consensus disorder prediction 456 475 - -
Bach10g00696 548 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 500 545 IPR015940 -
Bach10g00696 548 Pfam UBA/TS-N domain 506 542 IPR015940 -
Bach10g00696 548 FunFam Ubiquitin domain-containing protein DSK2b 489 547 - -
Bach10g00696 548 SMART uba_6 506 544 IPR015940 -
Bach10g00696 548 Pfam Ubiquitin family 21 88 IPR000626 GO:0005515
Bach10g00696 548 Gene3D - 193 251 - -
Bach10g00696 548 Gene3D - 7 101 - -
Bach10g00696 548 FunFam Ubiquitin domain-containing protein DSK2b 16 102 - -
Bach10g00696 548 ProSiteProfiles Ubiquitin domain profile. 19 88 IPR000626 GO:0005515
Bach10g00696 548 MobiDBLite consensus disorder prediction 93 120 - -
Bach10g00696 548 MobiDBLite consensus disorder prediction 274 349 - -
Bach10g00696 548 FunFam Ubiquitin domain-containing protein DSK2b 195 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00696 Bach-Chr10 4907432 4911433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00696 19 88 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 31.429 1.29e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00696 K04523 - qsa:O6P43_024949 765.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00807 4 5353458 5358156 Bach10g00696 10 4907432 4911433 BWGD
Bach10g00696 10 4907432 4911433 Bach10g00696 10 4907432 4911433 ECH