Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00687 ATGTCCTGCTCATCGTCATCAGGGTCTGAAGAAGATGATGAGGGCTTCGACTCCTACAGAAAAGGTGGTTACCATGCCGTCAGGGTCGGCGATCAGTTCTCCGGCGGCAGATACATAGCGCAGAGGAAACTGGGTTGGGGTCAGTTCTCCACTGTGTGGCTTGCTTATGATACTCAAACCTCAACATATGTTGCTCTTAAGATCCAGAAAAGTGCACCCCAGTTTGCTGAGGCTGCCCTTCATGAGATAGAAGTCCTTTTATCCATTGCTGATGGTGACCCGTCGAACTCAGAGTGTGTTGTCCAAATGATTGACAACTTTAAGCACACAGGCCCAAATGGGCAGCACCCATGCATGGTCCTTGAGTTTCTTGGGGATAGCTTACTTCGGCTGATCAAGTATAACCGTTATAAAGGCCTTCCGATGAATAAAGTGAGGGAGATTTGTAAATGCATTTTGATTGGTCTGGATTACTTGCATAGAGAACTTGGTATAATTCATACTGACTTAAAGCTTGAAAATATTCTTCTCTTTACCACCATTGATCCTGCCAAAGACCCTGTTAGATCTGTAACCGCCCCAATAATAGAGAGACCTGAGGGAAGTCTAAATGGTGGAGGAGTTACAAATCTTATTGAGAAAAGGTTGAAAAGGAGGGCGAGGAGGGCAGTTGCTAAGATATCTGAGAGAAGAGTTTCTATGGGAGGAATAGGAGAACCTCCAAAGTCTGAAAGAAATATTGATGGGATTGATGTGAGATGCAAGTTAGTAGATTTTGGAAATGCATGTTGGGCTGATAAGCAGTTTGCAGAAGAAATCCAGACAAGGCAATATAGAGCTCCTGAAGTTGTACTGCAGGCTGGTTATTCCTTCTCTGCTGACATGTGGTCTTTTGCTTGCACTGCTTTTGAGCTTGCCACCGGTGATATGATGTTTACTCCTAAGAGTGGACAAGGATTTAGTGAGGATGAGGATCACCTTGCCCTGATGATGGAACTCCTTGGAAAGATGCCCCGGAAGGTTGCAATCGGTGGAGTACGATCCAAGGATTTCTTTGACAGGCACGGTGATCTCAAGAGGATTCGGAGGCTTAAATTCTGTCCACTCGACAAATTGTTGATTGACAGATACAAGTTTTCAGAGACTGATGCTCGTGAGTTTACAGACTTTCTTTTACCAATTCTTGATTTTGCACCAGAGAAGCGACCAACGGCACAGCAGTGCCTGCAACACCCATGGTTCCAAAACAAGAATTCATCTCAGAATGAACAGATAAATAAACCCAGCATGGAGAAGGTGGACGTTGGGATGAGTAACCTTAAAATCAAGGTGGGAAAGTGAAGGGGAGAAAGGTGTTTGTCACTGTCAGACGCCATTTCCAGCTCCCTCCTTCCACCTGAATGACTATTGATTGTGATTTTTTTTTTTTTGGCTTGTTTTAATAAGATTTATTGTTATTATTATTAATTTTGGATTAACTACAAAGATGTAAAGTATTAACGAATTTTTCGAAGGAATTTGCGTGTATATTCTCCACATGATTTAAGTGATTTTG 1555 0.4289 MSCSSSSGSEEDDEGFDSYRKGGYHAVRVGDQFSGGRYIAQRKLGWGQFSTVWLAYDTQTSTYVALKIQKSAPQFAEAALHEIEVLLSIADGDPSNSECVVQMIDNFKHTGPNGQHPCMVLEFLGDSLLRLIKYNRYKGLPMNKVREICKCILIGLDYLHRELGIIHTDLKLENILLFTTIDPAKDPVRSVTAPIIERPEGSLNGGGVTNLIEKRLKRRARRAVAKISERRVSMGGIGEPPKSERNIDGIDVRCKLVDFGNACWADKQFAEEIQTRQYRAPEVVLQAGYSFSADMWSFACTAFELATGDMMFTPKSGQGFSEDEDHLALMMELLGKMPRKVAIGGVRSKDFFDRHGDLKRIRRLKFCPLDKLLIDRYKFSETDAREFTDFLLPILDFAPEKRPTAQQCLQHPWFQNKNSSQNEQINKPSMEKVDVGMSNLKIKVGK 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00687 446 SMART serkin_6 38 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach10g00687 446 Gene3D Transferase(Phosphotransferase) domain 1 92 414 - -
Bach10g00687 446 CDD STKc_SRPK 27 414 - -
Bach10g00687 446 ProSitePatterns Protein kinases ATP-binding region signature. 44 67 IPR017441 GO:0005524
Bach10g00687 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Bach10g00687 446 Gene3D Phosphorylase Kinase; domain 1 24 123 - -
Bach10g00687 446 FunFam Protein kinase superfamily protein 24 123 - -
Bach10g00687 446 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 8 223 - -
Bach10g00687 446 SUPERFAMILY Protein kinase-like (PK-like) 33 424 IPR011009 -
Bach10g00687 446 Pfam Protein kinase domain 253 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach10g00687 446 Pfam Protein kinase domain 39 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach10g00687 446 ProSiteProfiles Protein kinase domain profile. 38 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach10g00687 446 FunFam Serine/threonine-protein kinase SRPK 116 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00687 Bach-Chr10 4838639 4842434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00687 4 415 EF-hand Containing Proteins AT5G22840 51.627 2.41e-167 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Bach10g00687 Pkinase 4.6e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00687 K08832 - zju:107424333 740.725