Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00684 ATGAGCAAAGTTTGGCTTCTTGTGTTTGGGATCTTCTACAATGGTTTTCTTTCACAAGGAATCACTGATGTTTCTACGAGACCCAGTAGTGTTAACGTTGGGGTAGTTTTATCTTTCAATTCAACCGTAGGCAAAGTGGCAAAAGTTGCCATAGAAGCTGCAGTCGATGATATAAATTCCAATCCAACGATTCTAAAGGGAACTAAGCTTAATATTTCAATGCAGGACACAAAGTTCTCCAGTGGGTTCCTAGGAATTATTGATTCATTACTCTTGATGGAGAAAGACACCGTGGCCATAATTGGTCCCCAGTACTCAGTTATGGCTCATGTGATTTCACATATAGCAAATGAGCTGCAAATACCTTTACTGTCATTTGCAGCCACAGACCCTACTTTGTCTCCCCTTCAGTTCCCATACTTTGTTAGGACAACACAGAGTGATCTGTTTCAGATGGCTGCTATTGCAGATATTATTAGCTACTATGAGTGGAGAGATGTAATAGCAGTTTTCATTGATGATGATCATGGAAGAAATGGAATAGTTGCATTAGGGGATAGGCTAGCTGAAAAACGTGGTAAAATCTCACATAAAGCAACCCTTAAACCTGATAGCAATATAACCCGGGAAGAAATAAACAGTGTATTATTGAAGGTGGCTTCAATGGAATCTCGGGTTATAGTCCTCCACATAGACCCCGCTTTTGGTCTAGAAGTGCTTCGTGTGGCTAATGAACTTCGCATGGTAAATGGATATGTGTGGATAACCACTGATTGGCTTCCTACTATACTAGACACAGATCCATCCCGGGCCAGACACTTGAATGACATTCAAGGTGTTATCACCTTGCGCATGTACACCCCAGATAATTCAGGAACTAAATGGGATTTTGTTTCTAGGTGGAGCAATCTAACTAGAGAAAAATCTGCTAATCAGTGCCCTTTTGGGTTGAACACCTACGGTCTATATGCCTATGACACTGTCTGGGTTCTTGCTTATGCACTTGATGCATTTTTTAAAAGTGGTGGAACTTTGTCGTTTTCAAATGATTCTAGTTTAAACATTTTAAGGGGAGACAACCTGCATTTGGATACACTGTGTGTCTTTTCTAATGGGAATCTTCTGCTTAATAACATTTTAGAGGTTAATAAAACAGGTGTAACAGGCCAATTGATGTTTGGTTCAGATGGGAACCTTGTGGATCCTGCATTTGAAGTCATTAATGTGATTGGCACTGGCTTTAGAAGAATTGGTTATTGGTCCAATTCTTCTGGTTTATCAGTCAGTGAACCAGTTAAAAGTAAACCCCCCATGACAGCAAAACTATGTGGTGTCATCTGGCCCGGTCAATCAACTCAAACACCTAGAGGTTGGGTTTTCGCCAGCAATAATGGAAAGCATTTGAGAATCGGTGTCCCTCTCCGAATTAGTTTCCATGAATTTGTGTCAAAAATTGACACCGACAGGTTTAGTGGTTATTGTATTGATGTGTTTACTGCTGCACATGACTTGTTGCCATATCCTGTCCCATACAAGTTTATACCATTTGGTGATGGTCGTACCAACCCAGTGAACTCAGATCTTCTGAACATGATTACAACTGGTAAATTTGATGCTGTGGTGGGTGACATTACCATTACCACAAACAGATCAAAGATGGTGGACTTCACACAGCCATACATTGAGTCAGGACTAGTTGTTGTCGCCCCTATCAGGAAGTTGAATTCTAGTGCTTGGGCTTTCTTGAGACCATTTACTCCAATGATGTGGTTTGTGACAGGAATGTTTTTCCTTGTTTTGGGAGCTGTTGTGTGGATTTTAGAACGCAGGATAAATGATGATTTTAGAGGCCCAGCTAGAAGGCAGTTTGTGACCATTATATGGTTTAGCTTTTCAACCTTGTTCTTTGCTCATGGAGAAAAAACTGCGAGCACCCTTGGTCGCTTAGTACTGATTATATGGCTATTTGTGGTTCTAATACTCAACTCAAGCTATATTGCAAGTTTGACCTCTATGCTTACGGTAGAACAACTCTCTTCCTCAGTGAAGGGAATTGAAAGCTTGGCTGCAAGCAATGATCGCATTGGTTACCTGAGCGGGTCATTTTCCGAAAATTACCTGGCTGAGGAGCTCAACATACACAAATCCAGGCTTGTTCCTCTGAACTCCCCTTCAGAATATGAGAAGGCCTTGAAAGATGGACCTGGTAAGGGTGGTGTTGCTGCAGTAGTAGATGAACGGGCATACATGGAGCTCTTTCTGGCAACTAGGTGTGAATTTGGCATTGTTGGTCAAGAGTTCACCAAAATGGGATGGGGCTTTGCTTTCCCAAGGGACTCTCCCCTGGCCATTGACATGTCAACTGCCATACTAAAACTATCTGAGAATGGGGGTCTCCAGAGAATTCATGATAAATGGCTTACAAGAAGTGCTTGCATTGCGGGAGGTGCAAAGCAAGGCGTAGACAGACTTGAGCTTAAACGCTTCTGGGGTCTGTTTCTTCTAAGCGGCACAGCATGCGTTATTGCTCTTGTGTGCTATTTTATTCGGATGACTTACCGTTTCAGCAGGCACTCCAATGGTAATCTTGAGCGCTCATCACACTCAGCTCGTCTTCTCTCGTTTCTCTCCTTTGTCAATGAAAAAGAAGAAGATAAAAACAGAACAAAGAAAAGAAGAAAGGAAAGGGGCAGCAGCAGAAGAGTGGTGCATGAAAATGGGTCCAATGCTAGTGTCCATGTTGACATTTGA 2751 0.4209 MSKVWLLVFGIFYNGFLSQGITDVSTRPSSVNVGVVLSFNSTVGKVAKVAIEAAVDDINSNPTILKGTKLNISMQDTKFSSGFLGIIDSLLLMEKDTVAIIGPQYSVMAHVISHIANELQIPLLSFAATDPTLSPLQFPYFVRTTQSDLFQMAAIADIISYYEWRDVIAVFIDDDHGRNGIVALGDRLAEKRGKISHKATLKPDSNITREEINSVLLKVASMESRVIVLHIDPAFGLEVLRVANELRMVNGYVWITTDWLPTILDTDPSRARHLNDIQGVITLRMYTPDNSGTKWDFVSRWSNLTREKSANQCPFGLNTYGLYAYDTVWVLAYALDAFFKSGGTLSFSNDSSLNILRGDNLHLDTLCVFSNGNLLLNNILEVNKTGVTGQLMFGSDGNLVDPAFEVINVIGTGFRRIGYWSNSSGLSVSEPVKSKPPMTAKLCGVIWPGQSTQTPRGWVFASNNGKHLRIGVPLRISFHEFVSKIDTDRFSGYCIDVFTAAHDLLPYPVPYKFIPFGDGRTNPVNSDLLNMITTGKFDAVVGDITITTNRSKMVDFTQPYIESGLVVVAPIRKLNSSAWAFLRPFTPMMWFVTGMFFLVLGAVVWILERRINDDFRGPARRQFVTIIWFSFSTLFFAHGEKTASTLGRLVLIIWLFVVLILNSSYIASLTSMLTVEQLSSSVKGIESLAASNDRIGYLSGSFSENYLAEELNIHKSRLVPLNSPSEYEKALKDGPGKGGVAAVVDERAYMELFLATRCEFGIVGQEFTKMGWGFAFPRDSPLAIDMSTAILKLSENGGLQRIHDKWLTRSACIAGGAKQGVDRLELKRFWGLFLLSGTACVIALVCYFIRMTYRFSRHSNGNLERSSHSARLLSFLSFVNEKEEDKNRTKKRRKERGSSRRVVHENGSNASVHVDI 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00684 916 PIRSF IGluLR_plant 1 914 IPR017103 -
Bach10g00684 916 CDD PBP1_GABAb_receptor_plant 32 429 IPR044440 -
Bach10g00684 916 Gene3D - 49 401 - -
Bach10g00684 916 FunFam Glutamate receptor 147 306 - -
Bach10g00684 916 Gene3D - 147 426 - -
Bach10g00684 916 SMART GluR_14 469 809 IPR001320 GO:0015276|GO:0016020
Bach10g00684 916 Gene3D - 463 577 - -
Bach10g00684 916 SUPERFAMILY Periplasmic binding protein-like II 440 809 - -
Bach10g00684 916 Gene3D - 578 713 - -
Bach10g00684 916 SUPERFAMILY Periplasmic binding protein-like I 27 458 IPR028082 -
Bach10g00684 916 CDD GluR_Plant 466 807 - -
Bach10g00684 916 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 31 882 IPR015683 -
Bach10g00684 916 Pfam Bacterial extracellular solute-binding proteins, family 3 481 808 IPR001638 -
Bach10g00684 916 MobiDBLite consensus disorder prediction 886 916 - -
Bach10g00684 916 Pfam Ligand-gated ion channel 809 839 IPR001320 GO:0015276|GO:0016020
Bach10g00684 916 Gene3D - 755 814 - -
Bach10g00684 916 FunFam Glutamate receptor 578 708 - -
Bach10g00684 916 FunFam Glutamate receptor 463 578 - -
Bach10g00684 916 FunFam Glutamate receptor 704 811 - -
Bach10g00684 916 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 44 60 - -
Bach10g00684 916 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 105 133 - -
Bach10g00684 916 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 324 336 - -
Bach10g00684 916 Pfam Receptor family ligand binding region 49 411 IPR001828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00684 Bach-Chr10 4824552 4828167 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00684 5 900 Ion Channels AT3G51480 59.868 0.0 1079
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00684 K05387 - gmx:100790502 1379.39