Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00683 ATGATTAAATTTTGGCTTGTGGTCTTGATGGTTCTGTCCAATGGATTCTATTCAACTGGGGCTGGCATGAATGATTCCACTGTACCGGATTCTGTAAATATTGGAATTCTCTATTCTTTCAATACTACTATTGGTAGAATTTTAAAAATCGCTATGGGAGCTGCAATTGATGATGTGAATTCTGATCCATCTGTTCTTGGTAAAACTCATTTGAATGTCTTAATGCAAGAGGATTCCAAGTACAGAGGTTTCCTGAGCATTGCTGAAACCTTGCAGCTGATGGCAAAACATACTGTGGCTATAATTGGTCCGCAATCCTCTGTTACGGCTCATGTCATATCTCATGTAGCAAATGAGCTCCGAGTTCCACTGCTATCATTCTCAGCAACAGACCCAGCCCTTTCTCCAGTTCAGTTCCCATTCTTCATCAGAACTGCTCAAAATGATCTTTTTCAGATGACTGCAATAGCAGAACTTGTTAGGTTTTATGAATGGAGAGAGGTTATTGCAATCTATGTTGATGATGACCAGGGGAGAAATGGAATTGCTGCACTGGGGGATACGCTTGCTGAGAGACGTTGTAAGATCTCATATAAAGCACCAATGACCGCTGAACCAACTAAGGAGGAGATTACTGATGTGCTTGTTCAGGTTGCTCTGGCAGAATCTCGGATTATAGTTCTTCACACTAATACTGGTATGGGGCCTAAGGTTTTCAGCGTGGCACAGAATCTTGGGATGATGGGAACTGGTTATGTCTGGATAGCCACTAGTTTCCTTGCTACTCAGCTGGAGACTGCTTATCCCCTCCCATCAGATGAAATGCGGGAAATTCAAGGAGTGATTACCCTACGCATGCACACACCAGATACGGAGCTTAAAAAGAGATTTGTTTCTAGGTGGAAAAACTTGACAAGAGGAAACACTGCTAATGGCCCCATGGGACTGACTACTTATTGTCTCTATGCATATGATACTGTTTGGTTACTTGCTCGTGCAATTGACACATTTTTCAAAATGGGGAATCGAATTACATTTTCACATGATTCGAAGTTATCTGGGCTACATGGTGACGCTTTACATCTTGATACTTTGAACATCTTCAATGAAGGGAATAATTTGCGTAGTTGTATTTTAGGGGTTAACATGACTGGTGTAACAGGTCAAGTCAGGTATACGTCTGATTGTAACCTTGTTGATCCAGCATATGAAATCCTCAATGTGATAGGGACAGGGTTTCGGAGGATTGGTTATTGGTCTAATCACTCTGGATTATCAGTTGTCCCTCCAGAATCACTTTATTCAAAACCAGCTAATCGTTCTAATCAAAAGCTAAATGATGTGATTTGGCCTGGAGATACAACCCAGAAGCCGCGTGGTTGGGTTTTTCCCAACAGTGGAAGGCGTTTAAATATTGGAATACCAAGAAGGGTTAGTTACCGTGAGTTTGTCTCTCCAGTACAAGGTACAGACTTGTTCAAGGGTTTCTGCATTGATGTATTTCTTGCTGCAGTGAACTTGTTGCCATATGGTGTCCCATATAATTTTATCCCGTTTGGGGATGGTCACAGCAATCCTAGTAACACTGAGCTTGTCCGTCTGATCACAGCGGGAGTCTTTGATGCTGCAGTAGGTGACATTACAATTACTACAGAGAGAACAAAGATGGTAGATTTCACTCAACCATTTATTGAGTCTGGTCTAGTAGTAGTAACACCCGTAAGGAAAATGGAATCCAGTGCTTGGGCCTTTCTGAGGCCATTTACTCCAATGATGTGGGCTGTCACAGCTATGTTCTTCCTAATAGTGGGAGCTGTTGTTTGGATTTTGGAACATAGGCTGAACGATGATTTTCGGGGACCTCCCAAAAAACAAGTAGTTACAATTTTGTGGTTTAGTTTTTCAACCATGTTCTTTTCCCACAGGGAAAATACAGTGAGCACTCTTGGTCGCGTTGTGCTGCTTATATGGTTATTTGTAGTTCTTATAATTAACTCAAGTTACACAGCAAGCCTGACCTCAATCCTAACAGTGCAACAGCTTGCTTCCCCTATCAAAGGCATCGAAAGTTTAGTTAATAGCAAAGATCGAATTGGCTACCTGCAGGGTTCTTTTACCAGAAATTATTTGATTGAGGAACTTGGTATTGATGAATCCAGACTAGTTCCCCTAAAGACACCAGAAGAGACTGCTAAAGCATTAAAAGATGGTTCCCATAATGGTGGTGTTACTGCATACATTGATGAGCGTGCATACATAGAGCTCTTCCTTTCAAGTCGGTGCGAGTTTACTATTGTAGGTCAAGAGTTCACAAGAAACGGTTGGGGATTTGCCTTTCCAAGAGACTCGCCATTAGCAATCGATCTGTCTACTGCGATTCTGGAATTGGCTGATAATGGAGACCTACAAAGGATCCATGACAAATGGCTTTTAAGTCGTGCTTGCCTATCTCAGGGTGCAAAGCTTGAAGTGGACAGACTTAATCTTAAAAGCTTTTGGGGCCTCTATCTAATGGCTGGGTTTGCTTGTTTTCTTACTCTCTTCATATATCTCATACAGATAATGAGGCAGTACAAGAAGCACTACTCGGAAGAACTTGTATCTGCTAGTCCTAGCCAACAAAGCTCAGGATCTTCCCGTGTTCGGACATTCCTTACATTTGTAGACGAAAAAGAAGAAGATGTCAAGAACCGCTCCAAGAGAAGGCAAATGGAGAGGATCTCAGACAGAATCAGTGATGGTGGATCAAGCTCAGCCATGGGCTCCAGTAAAGGATATACTCAATCATCATGTTCAAACAGAAACATAGATTGTAATAATGAATCATGACCAACTGTTGCCTCTGGAGGCCACTGCACCTGTGATCGTCCCTGATGCAACTA 2882 0.4209 MIKFWLVVLMVLSNGFYSTGAGMNDSTVPDSVNIGILYSFNTTIGRILKIAMGAAIDDVNSDPSVLGKTHLNVLMQEDSKYRGFLSIAETLQLMAKHTVAIIGPQSSVTAHVISHVANELRVPLLSFSATDPALSPVQFPFFIRTAQNDLFQMTAIAELVRFYEWREVIAIYVDDDQGRNGIAALGDTLAERRCKISYKAPMTAEPTKEEITDVLVQVALAESRIIVLHTNTGMGPKVFSVAQNLGMMGTGYVWIATSFLATQLETAYPLPSDEMREIQGVITLRMHTPDTELKKRFVSRWKNLTRGNTANGPMGLTTYCLYAYDTVWLLARAIDTFFKMGNRITFSHDSKLSGLHGDALHLDTLNIFNEGNNLRSCILGVNMTGVTGQVRYTSDCNLVDPAYEILNVIGTGFRRIGYWSNHSGLSVVPPESLYSKPANRSNQKLNDVIWPGDTTQKPRGWVFPNSGRRLNIGIPRRVSYREFVSPVQGTDLFKGFCIDVFLAAVNLLPYGVPYNFIPFGDGHSNPSNTELVRLITAGVFDAAVGDITITTERTKMVDFTQPFIESGLVVVTPVRKMESSAWAFLRPFTPMMWAVTAMFFLIVGAVVWILEHRLNDDFRGPPKKQVVTILWFSFSTMFFSHRENTVSTLGRVVLLIWLFVVLIINSSYTASLTSILTVQQLASPIKGIESLVNSKDRIGYLQGSFTRNYLIEELGIDESRLVPLKTPEETAKALKDGSHNGGVTAYIDERAYIELFLSSRCEFTIVGQEFTRNGWGFAFPRDSPLAIDLSTAILELADNGDLQRIHDKWLLSRACLSQGAKLEVDRLNLKSFWGLYLMAGFACFLTLFIYLIQIMRQYKKHYSEELVSASPSQQSSGSSRVRTFLTFVDEKEEDVKNRSKRRQMERISDRISDGGSSSAMGSSKGYTQSSCSNRNIDCNNES 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00683 942 MobiDBLite consensus disorder prediction 894 942 - -
Bach10g00683 942 Gene3D - 468 580 - -
Bach10g00683 942 FunFam Glutamate receptor 581 711 - -
Bach10g00683 942 CDD PBP1_GABAb_receptor_plant 33 429 IPR044440 -
Bach10g00683 942 Gene3D - 50 400 - -
Bach10g00683 942 FunFam Glutamate receptor 148 305 - -
Bach10g00683 942 Gene3D - 708 813 - -
Bach10g00683 942 FunFam Glutamate receptor 707 814 - -
Bach10g00683 942 Gene3D - 581 707 - -
Bach10g00683 942 Pfam Receptor family ligand binding region 50 410 IPR001828 -
Bach10g00683 942 SUPERFAMILY Periplasmic binding protein-like II 448 812 - -
Bach10g00683 942 Gene3D - 148 425 - -
Bach10g00683 942 Pfam Bacterial extracellular solute-binding proteins, family 3 493 810 IPR001638 -
Bach10g00683 942 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 33 886 IPR015683 -
Bach10g00683 942 Pfam Ligand-gated ion channel 811 843 IPR001320 GO:0015276|GO:0016020
Bach10g00683 942 CDD GluR_Plant 468 810 - -
Bach10g00683 942 MobiDBLite consensus disorder prediction 910 942 - -
Bach10g00683 942 MobiDBLite consensus disorder prediction 894 909 - -
Bach10g00683 942 PIRSF IGluLR_plant 1 935 IPR017103 -
Bach10g00683 942 FunFam Glutamate receptor 465 581 - -
Bach10g00683 942 SMART GluR_14 471 812 IPR001320 GO:0015276|GO:0016020
Bach10g00683 942 SUPERFAMILY Periplasmic binding protein-like I 28 462 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00683 Bach-Chr10 4816584 4820229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00683 5 908 Ion Channels AT3G51480 60.994 0.0 1157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00683 K05387 - gmx:100788917 1379