Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00678 ATGACTCGCACGCTTAGAATTCTCAAAACCGTAGACCACGCTACGGTGGCAGCACCACCGCCGGAGGCTGTTGCTTTGGAATCGGACTTCGTGGTGATTCTAGCCGCTCTGCTCTGTGCTCTCATATGCGTGGTGGGTCTCATCGCGGTCGCACGCTGCGCTTGGCTACGACGCGGCGCTGGCCCCGGTGCTTCCCCGAGACAAGCGTTGGCTAACAAGGGTCTGAAGAAGAAGGTGCTCCAATCGTTGCCTAAATTCACTTACATCAATAGCAATTCCAACAAGTGGGTGACTACGTTGGAGTGTGCGATTTGCTTGTCAGAGTTCGCCGAAGGCGAGGAGATCCGGGTGCTGCCGCAGTGTGGCCACGGGTTCCATGTGAATTGCATAGATACATGGCTCGGGTCTCATTCTTCATGCCCTTCTTGCCGGCAGATTCTGGCGGTGACAAGATGCCAGAAGTGCGGCCAGTATCCGGCGATTGGCGGCGGAGCTACCAGTATTTCTGTTACGGAAACAGAACTGAAATCTGGCGAAGAGCACAATGCTGCCGCTAGTAGTAATGCTAGTAACGGTATTACTGTTAGCGTAGATAATCACTCTCACGGTGTTAATAGTGGTTTCTTGCCTTAG 633 0.5355 MTRTLRILKTVDHATVAAPPPEAVALESDFVVILAALLCALICVVGLIAVARCAWLRRGAGPGASPRQALANKGLKKKVLQSLPKFTYINSNSNKWVTTLECAICLSEFAEGEEIRVLPQCGHGFHVNCIDTWLGSHSSCPSCRQILAVTRCQKCGQYPAIGGGATSISVTETELKSGEEHNAAASSNASNGITVSVDNHSHGVNSGFLP 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00678 210 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 64 149 IPR013083 -
Bach10g00678 210 SMART FANCL_C_2 98 155 - -
Bach10g00678 210 SUPERFAMILY RING/U-box 82 149 - -
Bach10g00678 210 CDD RING-H2_EL5-like 101 144 - -
Bach10g00678 210 ProSiteProfiles Zinc finger RING-type profile. 102 144 IPR001841 -
Bach10g00678 210 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 22 156 - -
Bach10g00678 210 SMART ring_2 102 143 IPR001841 -
Bach10g00678 210 Pfam Ring finger domain 101 144 IPR001841 -
Bach10g00678 210 FunFam E3 ubiquitin-protein ligase ATL6 64 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00678 Bach-Chr10 4767296 4767928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00678 7 155 C3H Transcription Factor Family AT1G76410 61.688 1.48e-61 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00678 - - gmx:100787383 298.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00834 4 5546065 5546944 Bach10g00678 10 4767296 4767928 BWGD