LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach10g00667	ATGAGTGATACCAAAAAAAATGAGAAAGCTGGGCTGGACGTGCCAGTGGCTGTAGAAGAAAGCCAGAAGTTGGTTGATGCACAGGTTCAACCTGAAGGTTCTTCTGCTCCTGCCGCGGTAGTGGAAAATTCAAATAATGATGAAAATGGGAAGGTAGGGGCACCTCCTAAAGATAAAAATGTGGAATCGGAGTCCATTTTGGAGGCGGTTCCACATCAAGAAGTTCAAAGTTCTATTCACCGAGTCCCAGTGGAAGATAATGATCAAATTTCGGTTAAGGCTGACTGTGAACCCACCTCAATGGTGAAGACCGAAGTCAATGAAGTACCTCAGAGAAGTTCAGGTGTCGAGAATGAGCCCATTGTTTGTGAAAATAATATTGATGCTACTGTAAGTGCAATAGAGATCAAGCCTGAGGCTTATGAAGCACCTGACAGTAAAACTTGCAATAATGGTGACTCCATACCCTCAATCCATAATGAACCCGCTTCACTTCAAGTTGTACCTGCTCAAACTAAAGCTGAAGTTGGGAATGGAGTAGAAGTTGAGAATAAGATTAGTGAAAAGCAAATTGCTGCACCTGCAGACAATGTGAATTCAAACTCAAAGCACTCCTTTTTTTTAGATGCTGACCATTCATATGATGGCAATGAGTCCGGAACAGAAGAAGAGCAATCAGCTTTCATGAAAGAGCTTGAAAGTTTCTTCAGGGAGAGGAGCATGGAATTCAAACCCCCAAAGTTCTATGGAGAGGGCCTTAATTGCCTTAAGTTGTGGAGAGCTGTAACCAGATTGGGCGGCTATGATAAGGTTACTTCATGTAAGTTATGGCGGCAAGTGGGAGAGTCTTTCAAACCACCAAAGACGTGCACTACAGTTTCATGGACATTTCGAGGATTTTATGAGAAGGCACTCCTTGATTATGAAAGGTATAACACAAAGGGTGGTGAACTGTCTGTGCCTATTGCTTCTCATTCGGAGCCCATGAATCTTGAAAATCAGGCTTCAGCATCAGGTAGAGCACCAAGGAGAGATGCTGCTGCAAGGGCCATGCAGGGTTGGCACTCACAGCGTCTCCTTGGTAATGGTGAAGTTAGTGACCCTATTATAAAGGATAGGAATTCTCTTTCTATGCAAAAGCGTGAAAAGCAACTTAAAAGCATCAATTTACTTAAACGTAAGAAACCATCTTACATGGATAATGCAGTCAAAGCAGCACGCAGCAAACCAACTAAACCACAATTGGATACAACAGTGGTTGATATTGGACCTCCAGCTGATTGGGTAAAAGTCAATGTCCAGAAAACTAAAGATTGTTTTGAGGTCTATGCTTTAGTTCCTGGCCTTCTTCGGGAAGAGGTGCGTGTTCAATCTGATCCAGTTGGGCGCTTGGTCATAAGTGGCGAACCAGAGCATCCTGATAATCCATGGGGTGTGACACCTTTCAAAAAGGTTGTCAGCTTACCTTCAAGAATTGATCCCCATCAGACATCGGCTGTGGTGACCCTGCATGGACAGTTGTTTGTTCGTGTGCCATTTGAGCAGTCAGAATAGACCAGGCTAAGGGATGCATGTCTACGCTTTACCATGGTATATAGGATTGTTAACCTTGAATCTATTTAGAGGAACGAATTCTGCTCCGTCAGACTTACGACAAATTCCTAGCTCAGTGGGACTGGGGGGGTATATTAATGTTAGTGATACTCAGATTTTTCGTCCGTGATTCTCTCTTGTATTACAGTTTGACCATGTTGATATCAGCCAGCTAGGATTCCGTAATTACTGAATCATGTCATAATATTACAATTTGTGTAGTGATATTGCTGCCAGAAGATGTCGATCTTCT	1846	0.4301	MSDTKKNEKAGLDVPVAVEESQKLVDAQVQPEGSSAPAAVVENSNNDENGKVGAPPKDKNVESESILEAVPHQEVQSSIHRVPVEDNDQISVKADCEPTSMVKTEVNEVPQRSSGVENEPIVCENNIDATVSAIEIKPEAYEAPDSKTCNNGDSIPSIHNEPASLQVVPAQTKAEVGNGVEVENKISEKQIAAPADNVNSNSKHSFFLDADHSYDGNESGTEEEQSAFMKELESFFRERSMEFKPPKFYGEGLNCLKLWRAVTRLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERYNTKGGELSVPIASHSEPMNLENQASASGRAPRRDAAARAMQGWHSQRLLGNGEVSDPIIKDRNSLSMQKREKQLKSINLLKRKKPSYMDNAVKAARSKPTKPQLDTTVVDIGPPADWVKVNVQKTKDCFEVYALVPGLLREEVRVQSDPVGRLVISGEPEHPDNPWGVTPFKKVVSLPSRIDPHQTSAVVTLHGQLFVRVPFEQSE	517

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Bach10g00667	517	SUPERFAMILY	ARID-like	216	326	IPR036431	GO:0003677
Bach10g00667	517	PANTHER	AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT	65	516	IPR045147	GO:0006357
Bach10g00667	517	Pfam	ARID/BRIGHT DNA binding domain	225	309	IPR001606	GO:0003677
Bach10g00667	517	MobiDBLite	consensus disorder prediction	25	61	-	-
Bach10g00667	517	Pfam	Hsp20/alpha crystallin family	434	516	IPR002068	-
Bach10g00667	517	FunFam	AT-rich interactive domain-containing protein 3	409	517	-	-
Bach10g00667	517	ProSiteProfiles	ARID domain profile.	222	313	IPR001606	GO:0003677
Bach10g00667	517	CDD	ACD_sHsps-like	432	512	-	-
Bach10g00667	517	SMART	bright_3	223	314	IPR001606	GO:0003677
Bach10g00667	517	SMART	ARID_2	219	309	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach10g00667	Bach-Chr10	4697103	4701976	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach10g00667	205	515	ARID Transcription Factor Family	AT1G76510	60.759	1.63e-128	380

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	ARID	Bach10g00667		HSP20	1.3e-05	CL0190

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach10g00667	-		-	gmx:100791081	752.666

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bach4g00846	4	5627431	5633221	Bach10g00667	10	4697103	4701976	BWGD

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