Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00667 ATGAGTGATACCAAAAAAAATGAGAAAGCTGGGCTGGACGTGCCAGTGGCTGTAGAAGAAAGCCAGAAGTTGGTTGATGCACAGGTTCAACCTGAAGGTTCTTCTGCTCCTGCCGCGGTAGTGGAAAATTCAAATAATGATGAAAATGGGAAGGTAGGGGCACCTCCTAAAGATAAAAATGTGGAATCGGAGTCCATTTTGGAGGCGGTTCCACATCAAGAAGTTCAAAGTTCTATTCACCGAGTCCCAGTGGAAGATAATGATCAAATTTCGGTTAAGGCTGACTGTGAACCCACCTCAATGGTGAAGACCGAAGTCAATGAAGTACCTCAGAGAAGTTCAGGTGTCGAGAATGAGCCCATTGTTTGTGAAAATAATATTGATGCTACTGTAAGTGCAATAGAGATCAAGCCTGAGGCTTATGAAGCACCTGACAGTAAAACTTGCAATAATGGTGACTCCATACCCTCAATCCATAATGAACCCGCTTCACTTCAAGTTGTACCTGCTCAAACTAAAGCTGAAGTTGGGAATGGAGTAGAAGTTGAGAATAAGATTAGTGAAAAGCAAATTGCTGCACCTGCAGACAATGTGAATTCAAACTCAAAGCACTCCTTTTTTTTAGATGCTGACCATTCATATGATGGCAATGAGTCCGGAACAGAAGAAGAGCAATCAGCTTTCATGAAAGAGCTTGAAAGTTTCTTCAGGGAGAGGAGCATGGAATTCAAACCCCCAAAGTTCTATGGAGAGGGCCTTAATTGCCTTAAGTTGTGGAGAGCTGTAACCAGATTGGGCGGCTATGATAAGGTTACTTCATGTAAGTTATGGCGGCAAGTGGGAGAGTCTTTCAAACCACCAAAGACGTGCACTACAGTTTCATGGACATTTCGAGGATTTTATGAGAAGGCACTCCTTGATTATGAAAGGTATAACACAAAGGGTGGTGAACTGTCTGTGCCTATTGCTTCTCATTCGGAGCCCATGAATCTTGAAAATCAGGCTTCAGCATCAGGTAGAGCACCAAGGAGAGATGCTGCTGCAAGGGCCATGCAGGGTTGGCACTCACAGCGTCTCCTTGGTAATGGTGAAGTTAGTGACCCTATTATAAAGGATAGGAATTCTCTTTCTATGCAAAAGCGTGAAAAGCAACTTAAAAGCATCAATTTACTTAAACGTAAGAAACCATCTTACATGGATAATGCAGTCAAAGCAGCACGCAGCAAACCAACTAAACCACAATTGGATACAACAGTGGTTGATATTGGACCTCCAGCTGATTGGGTAAAAGTCAATGTCCAGAAAACTAAAGATTGTTTTGAGGTCTATGCTTTAGTTCCTGGCCTTCTTCGGGAAGAGGTGCGTGTTCAATCTGATCCAGTTGGGCGCTTGGTCATAAGTGGCGAACCAGAGCATCCTGATAATCCATGGGGTGTGACACCTTTCAAAAAGGTTGTCAGCTTACCTTCAAGAATTGATCCCCATCAGACATCGGCTGTGGTGACCCTGCATGGACAGTTGTTTGTTCGTGTGCCATTTGAGCAGTCAGAATAGACCAGGCTAAGGGATGCATGTCTACGCTTTACCATGGTATATAGGATTGTTAACCTTGAATCTATTTAGAGGAACGAATTCTGCTCCGTCAGACTTACGACAAATTCCTAGCTCAGTGGGACTGGGGGGGTATATTAATGTTAGTGATACTCAGATTTTTCGTCCGTGATTCTCTCTTGTATTACAGTTTGACCATGTTGATATCAGCCAGCTAGGATTCCGTAATTACTGAATCATGTCATAATATTACAATTTGTGTAGTGATATTGCTGCCAGAAGATGTCGATCTTCT 1846 0.4301 MSDTKKNEKAGLDVPVAVEESQKLVDAQVQPEGSSAPAAVVENSNNDENGKVGAPPKDKNVESESILEAVPHQEVQSSIHRVPVEDNDQISVKADCEPTSMVKTEVNEVPQRSSGVENEPIVCENNIDATVSAIEIKPEAYEAPDSKTCNNGDSIPSIHNEPASLQVVPAQTKAEVGNGVEVENKISEKQIAAPADNVNSNSKHSFFLDADHSYDGNESGTEEEQSAFMKELESFFRERSMEFKPPKFYGEGLNCLKLWRAVTRLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERYNTKGGELSVPIASHSEPMNLENQASASGRAPRRDAAARAMQGWHSQRLLGNGEVSDPIIKDRNSLSMQKREKQLKSINLLKRKKPSYMDNAVKAARSKPTKPQLDTTVVDIGPPADWVKVNVQKTKDCFEVYALVPGLLREEVRVQSDPVGRLVISGEPEHPDNPWGVTPFKKVVSLPSRIDPHQTSAVVTLHGQLFVRVPFEQSE 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00667 517 SUPERFAMILY ARID-like 216 326 IPR036431 GO:0003677
Bach10g00667 517 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT 65 516 IPR045147 GO:0006357
Bach10g00667 517 Pfam ARID/BRIGHT DNA binding domain 225 309 IPR001606 GO:0003677
Bach10g00667 517 MobiDBLite consensus disorder prediction 25 61 - -
Bach10g00667 517 Pfam Hsp20/alpha crystallin family 434 516 IPR002068 -
Bach10g00667 517 FunFam AT-rich interactive domain-containing protein 3 409 517 - -
Bach10g00667 517 ProSiteProfiles ARID domain profile. 222 313 IPR001606 GO:0003677
Bach10g00667 517 CDD ACD_sHsps-like 432 512 - -
Bach10g00667 517 SMART bright_3 223 314 IPR001606 GO:0003677
Bach10g00667 517 SMART ARID_2 219 309 - -
Bach10g00667 517 CDD ARID 224 309 - -
Bach10g00667 517 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 417 517 IPR002068 -
Bach10g00667 517 Gene3D - 222 319 IPR036431 GO:0003677
Bach10g00667 517 Gene3D - 415 517 IPR008978 -
Bach10g00667 517 FunFam AT-rich interactive domain-containing protein 3 222 321 - -
Bach10g00667 517 SUPERFAMILY HSP20-like chaperones 426 513 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00667 Bach-Chr10 4697103 4701976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00667 205 515 ARID Transcription Factor Family AT1G76510 60.759 1.63e-128 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Bach10g00667 HSP20 1.3e-05 CL0190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00667 - - gmx:100791081 752.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00846 4 5627431 5633221 Bach10g00667 10 4697103 4701976 BWGD