Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00653 ATGCCCGCAAAATCCCGACGCCAAAGAGTCCTTAACCCTGGTCGTTTTCTCGTTGTGCTCTGTGGTTCAAGTTTGTCTGGCGTGAAAATGGCGGATTCTCCCATCAGAAGGATGTCAAGGTCCCCTTCCCCTTGGAGAGCTCAGTCAAGATCAAGATCAAGGTCTAGGTCTAGGCCAAGGTCTAGGTCCAGATCAAGATCCTGGTCAAGACAGAGACCTAGGTCCCATTCAAGGAGTAGGGGCAGGTCAAGGTCTCGTGGCCGAGCTGATACTGGAAATCCTGGGAATACTCTTTATGTGACTGGCCTATCTTCGAGGGTCACTGAGAGTGATCTAGCAGATCACTTTTCTAAGGAAGGAAAGGTTTCTTCATGCTTTCTTGTGGTGGAGCCCCGTACTAATATATCTCGTGGGTTTGCTTTTGTTACGATGGATACTGCTGAGGATGCCAACCGCTGCATCAAGTATCTCAATCAATCAGTTTTACAAGGCCGTTATATTACGGTTGAGCAGAATACATTGCCTCTGCTGTGTTGGCAGCAATCAAAGAGTTCATCCATGACAAGTATAGTGAAACAGCCTGATCATGGCAAGCTTAAACAGCTAATCAAATGCGTCTGATCCACTAAACATAGCAACTATATTGCCCAACAACTTTACAACCTCAGCATTCACTTTCAACTCTCAACTAATCAACGGACATTATCAACAACTTTCTAATCAAGCTTTTATGGTATCTCATACCTGGCATTAATCCTGTGTATCTGGATTTTTTTTTTCCCTTTTCTCGTAAGCTTGGCTTATTTCCTTGTTTCTCCCCGTTCTCTCCACTCTGAAACTTGCTTTTAAACTTCAAACTTTCTTAACCTTAGTGTTAAATGAGAAGAAGTTATTAACGTAAAAGATCATCGCAAGGTTGAAACATCTATGCTATTAGTGGTACCTGAATGATTTATGAGGATTGTCTTTTGCTATGGAAAGCCCAAGGATTGTGCTAATGTATTTTATTTTCAGTCTCGAAGAAAA 1026 0.425 MPAKSRRQRVLNPGRFLVVLCGSSLSGVKMADSPIRRMSRSPSPWRAQSRSRSRSRSRPRSRSRSRSWSRQRPRSHSRSRGRSRSRGRADTGNPGNTLYVTGLSSRVTESDLADHFSKEGKVSSCFLVVEPRTNISRGFAFVTMDTAEDANRCIKYLNQSVLQGRYITVEQNTLPLLCWQQSKSSSMTSIVKQPDHGKLKQLIKCV 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00653 206 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 98 167 IPR000504 GO:0003723
Bach10g00653 206 MobiDBLite consensus disorder prediction 51 83 - -
Bach10g00653 206 MobiDBLite consensus disorder prediction 31 100 - -
Bach10g00653 206 PANTHER TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED 94 179 - -
Bach10g00653 206 Gene3D - 37 173 IPR012677 -
Bach10g00653 206 FunFam RNA-binding (RRM/RBD/RNP motifs) family protein 32 176 - -
Bach10g00653 206 Coils Coil 206 206 - -
Bach10g00653 206 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 96 174 IPR000504 GO:0003723
Bach10g00653 206 SMART rrm1_1 97 170 IPR000504 GO:0003723
Bach10g00653 206 SUPERFAMILY RNA-binding domain, RBD 50 170 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00653 Bach-Chr10 4594499 4597341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00653 93 173 Eukaryotic Initiation Factors Gene Family AT3G11400 35.802 5.91e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00653 K12897 - cit:102618370 159.844