Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00641 ATGTCCTGGGAAGTGAAGGAAGAGATACAAAGTGAAGAGCAGCATGCAAAGGATTACAGAGACCCTCCTCCAGTGGCTATCTTGAACATAGGAGAGCTCATGCAATGGTCATTCTATAGGGCTCTGATAGCTGAGTTTGTAGCTACCCTTCTCTTCCTTTATGTTACTATAGCTACTGTCATTGGCCACAAGAAGCAAATTGGCCCCTGCGACGGGGTTGGCCTCCTCGGCATTGCTTGGTCCTTCGGTGGCATGATTTTCGTCCTTGTCTACTGCACTGCTGGAATATCAGGTGGTCATATAAACCCTGCCGTAACGTTGGGGCTACTTGTAACGAGAAAGGTGTCCTTAGTTAGGGCGATGGCCTACATGGTATCACAATGCTTAGGAGCTATTTGTGGCGTGGGTTTAGTGAAGGCTTTTATGAAGCCTTACTATAGTAGGCTCGGGGGTGGTGCCAATGCAGTTTCACCAGGCTACTCCAAGGGCACAGCTTTGGGAGCTGAGATCATTGGGACTTTCATGCTGGTTTACACCGTCTTCTCAGCCACCGATCCTAAAAGGAGTGCACGTGATTGCGATGTTCCTGTTTTGGCTCCCTTGCCGATAGGTTTTGCTGTCTTTATGGTGCACTTGGCTAGTATTCCTATCACTGGCGTTGGCATTAACCCTGGTAGGAGTTTTGGTGCTGCCGTGATCTACAACAACAGCAAAGTCTGGGACGATCAGTGGATTTTCTGGCTTGGACCCTTCGTTGGGGCACTAGTTGCAGCGGCATACCATCAATACATACTTAGAGCACCAGCTCTCAAAGCTTTCGGGTCGTTTCACAGTAATCACACCAACTAA 849 0.4876 MSWEVKEEIQSEEQHAKDYRDPPPVAILNIGELMQWSFYRALIAEFVATLLFLYVTIATVIGHKKQIGPCDGVGLLGIAWSFGGMIFVLVYCTAGISGGHINPAVTLGLLVTRKVSLVRAMAYMVSQCLGAICGVGLVKAFMKPYYSRLGGGANAVSPGYSKGTALGAEIIGTFMLVYTVFSATDPKRSARDCDVPVLAPLPIGFAVFMVHLASIPITGVGINPGRSFGAAVIYNNSKVWDDQWIFWLGPFVGALVAAAYHQYILRAPALKAFGSFHSNHTN 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00641 282 PRINTS Major intrinsic protein family signature 244 264 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach10g00641 282 PRINTS Major intrinsic protein family signature 40 59 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach10g00641 282 PRINTS Major intrinsic protein family signature 168 186 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach10g00641 282 PRINTS Major intrinsic protein family signature 204 226 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach10g00641 282 PRINTS Major intrinsic protein family signature 82 106 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach10g00641 282 PRINTS Major intrinsic protein family signature 119 138 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach10g00641 282 NCBIfam MIP family channel protein 44 260 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach10g00641 282 ProSitePatterns MIP family signature. 100 108 IPR022357 -
Bach10g00641 282 FunFam Probable aquaporin PIP1-2 25 280 - -
Bach10g00641 282 Gene3D Glycerol uptake facilitator protein. 25 282 IPR023271 -
Bach10g00641 282 Pfam Major intrinsic protein 33 261 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach10g00641 282 CDD MIP 40 264 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach10g00641 282 SUPERFAMILY Aquaporin-like 32 266 IPR023271 -
Bach10g00641 282 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 6 269 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00641 Bach-Chr10 4527926 4529445 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00641 1 282 Major Intrinsic Protein MIP AT4G35100 80.851 1.02e-170 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00641 K09872 - egr:104418957 478.404