Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00613 GTTTTCTCTCTCTATCGTTCAAAAGTCTCTTTTGACCACCACCCTCTTTCTTCCCTTCTTCCTCCTATCTGCTACAACCTTTCCTTCTGTGTAATCTGACATCCATTTCTCTCTCAATTCCCAATACCTCTAAAGAAATAAATACTGCTAGTATATATTAACATTTTCACATGGTTTTGATCTAACAATACCTTTAAGCATTTTTCATTCTCGCCGATCATGGGTACCTGCTTTTCTACCATCAGAGTCAGTGGCTCAAACAGCAATACTGCGGCGGCGGCGGCTGCGGCTGCCGCCGCCAACACCACCACCACCACCACCACTGTCAACCACAATCTTAAAGAGAGTACAAGGCCTCAAGCGAGGGTATATAAGCAACAGCAATCTTCAAACGATGAACGACAGAGAGCACCAAATGAGACCCAGAAGAATCAGACAAAAAGAAATTCACAGCAGCAAAAACCCAATAACAAGACAAATACGAGGCGCCAAGGGGGACATATTCCATGCGGAAAGCGTACAGATTTCGGTTATGACAAAGATTTCGATAAGCGGTATTCGCTTGGGAAATTGTTGGGGCATGGACAATTTGGTTACACATATGTCGGAGTTGATAAATCAAATGGGGATCGGGTAGCCGTGAAGAGAATTGAGAAGGGAAAGATGGTTCTTCCGATAGCTGTTGAGGATGTTAAGCGAGAGGTCAAGATATTGAAAGAACTTACAGGCCACGAGAATGTGGTTCAGTTCTATAATGCTTTTGAGGATAATTCTTATGTATTCATAGTTATGGAATTATGCGAGGGTGGAGAGCTGTTAGACCGGATATTGACTAAAAAAGATAGCCGTTATACTGAAAAAGATGCAGCAGTGGTAGTAAGGCAGATGCTCAAGGTTGCTGCTCAGTGTCATTTACATGGTTTAGTACACCGGGACATGAAACCAGAGAATTTTCTTTTCAAATCGACCAAAGAAGATTCATCTTTAAAGGCTACCGATTTTGGCTTGTCAGATTTCATAAAACCTGGAAAAAGGTTTCAAGATATCGTTGGCAGTGCTTACTATGTTGCACCTGAAGTGTTAAAACGCAGGTCAGGCCCTGAATCAGATGTATGGAGTATTGGTGTTATTACGTACATATTGCTTTGTGGGAGGCGCCCATTTTGGGATAAGACTGAGGATGGTATCTTCAAGGAGGTCCTGAGAAACAAGCCTGATTTTCGCCGGAAACCATGGCCAACCATAAGCAATGCTGCAAAAGATTTCGTAAAGAAGTTGCTGGTAAAGGATCCTCGAGCAAGATATACTGCTGCTCAGGCTCTATCACATCCGTGGGTTAGAGAAGGAGGAGAGGCATTAGAAATACCTATTGACATATCTGTCCTGAACAACATGCGGCAGTTTGTGAAGTATAGTCGATTGAAACAAGTTGCACTGAGGGCATTGGCTAGTACACTTAATGAAGAAGAGTTGGCTGATATCAAAGATCAATTTCAAGCAATAGATGTGGACAAAAATGGTTCTATCAGTCTAGAAGAGATGAGACAGGCTCTTGCTAAAGATCTACCCTGGAGGCTGAAAGATTCGCGTGTACTGGAGATATTGCAAGCGATAGACAGCAACACAGACGGGCTTGTCGATTTCTGTGAGTTTGTGGCAGCTACATTACATGTGCATCAATTGGAGGAACATGACTCGGATAAGTGGCAGCAACGGTCACAGGCCGCATTTGAGAAATTCGACCTAGATAAGGATGGCTATATTACTCCAGAAGAACTGAGAATGCATACTGGCATGAAAGGCTCCATTGATTCACTACTTGAGGAGGCTGACATTGACAAAGATGGAAAAATCAGCTTATCGGAATTCCGAAGACTTCTAAGAACTGCAAGCATTAGTTCACGAAGTGTGACGAGCCCAACTGCCCGACCGCGGAAGAATTAGATCAAAGGTGTTTCAGTTGCTCGGCTTCAGTCAAGTCCGTCAAGATGCAAGGGTGGTCGAGTTCCTTCAAAATTATATATAGTATGCAGATTGTGCTCAAGCCCTTGTTTGCTCTCTGACTGTATTCTACGACTCTCAAACTCCAGTTCCTGACTGTGGCATCCTACGTGGGATTGTGTACACGACTACAGCAAGAATTGTTTGGTCTGTTGGCGTAGAGCTGCATAGATTGGGTTCAGATACAACCATGTACATCATTTTGGAATGTCAGGGTTTATTGGTTGTGCCATAAACGTATTGTAACTATAAATAAATATAAATGAAATATGTCCATTTAGAACTCAATTGTCTTCCTTCTCGCTTCCACGATAATGTTGCATCTGTGTAAAGGAATTTTTACCTTTTA 2350 0.4264 MGTCFSTIRVSGSNSNTAAAAAAAAAANTTTTTTTVNHNLKESTRPQARVYKQQQSSNDERQRAPNETQKNQTKRNSQQQKPNNKTNTRRQGGHIPCGKRTDFGYDKDFDKRYSLGKLLGHGQFGYTYVGVDKSNGDRVAVKRIEKGKMVLPIAVEDVKREVKILKELTGHENVVQFYNAFEDNSYVFIVMELCEGGELLDRILTKKDSRYTEKDAAVVVRQMLKVAAQCHLHGLVHRDMKPENFLFKSTKEDSSLKATDFGLSDFIKPGKRFQDIVGSAYYVAPEVLKRRSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPTISNAAKDFVKKLLVKDPRARYTAAQALSHPWVREGGEALEIPIDISVLNNMRQFVKYSRLKQVALRALASTLNEEELADIKDQFQAIDVDKNGSISLEEMRQALAKDLPWRLKDSRVLEILQAIDSNTDGLVDFCEFVAATLHVHQLEEHDSDKWQQRSQAAFEKFDLDKDGYITPEELRMHTGMKGSIDSLLEEADIDKDGKISLSEFRRLLRTASISSRSVTSPTARPRKN 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00613 574 SMART efh_1 457 485 IPR002048 GO:0005509
Bach10g00613 574 SMART efh_1 529 557 IPR002048 GO:0005509
Bach10g00613 574 SMART efh_1 499 527 IPR002048 GO:0005509
Bach10g00613 574 SMART efh_1 420 448 IPR002048 GO:0005509
Bach10g00613 574 ProSitePatterns EF-hand calcium-binding domain. 466 478 IPR018247 -
Bach10g00613 574 ProSitePatterns EF-hand calcium-binding domain. 429 441 IPR018247 -
Bach10g00613 574 SUPERFAMILY EF-hand 404 557 IPR011992 -
Bach10g00613 574 Pfam Protein kinase domain 113 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach10g00613 574 ProSiteProfiles Protein kinase domain profile. 113 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach10g00613 574 MobiDBLite consensus disorder prediction 27 99 - -
Bach10g00613 574 ProSiteProfiles EF-hand calcium-binding domain profile. 531 560 IPR002048 GO:0005509
Bach10g00613 574 ProSiteProfiles EF-hand calcium-binding domain profile. 416 451 IPR002048 GO:0005509
Bach10g00613 574 FunFam Calcium-dependent protein kinase 28 414 483 - -
Bach10g00613 574 Gene3D Phosphorylase Kinase; domain 1 106 198 - -
Bach10g00613 574 ProSitePatterns Protein kinases ATP-binding region signature. 119 142 IPR017441 GO:0005524
Bach10g00613 574 PANTHER SERINE/THREONINE-PROTEIN KINASE 86 547 - -
Bach10g00613 574 ProSiteProfiles EF-hand calcium-binding domain profile. 495 530 IPR002048 GO:0005509
Bach10g00613 574 MobiDBLite consensus disorder prediction 69 91 - -
Bach10g00613 574 MobiDBLite consensus disorder prediction 27 62 - -
Bach10g00613 574 FunFam CDPK-related kinase 1 106 198 - -
Bach10g00613 574 CDD STKc_CAMK 112 372 - -
Bach10g00613 574 Gene3D - 394 483 - -
Bach10g00613 574 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
Bach10g00613 574 Gene3D - 399 553 - -
Bach10g00613 574 ProSiteProfiles EF-hand calcium-binding domain profile. 453 488 IPR002048 GO:0005509
Bach10g00613 574 Pfam EF-hand domain pair 501 554 IPR002048 GO:0005509
Bach10g00613 574 Pfam EF-hand domain pair 420 482 IPR002048 GO:0005509
Bach10g00613 574 CDD EFh 501 555 IPR002048 GO:0005509
Bach10g00613 574 ProSitePatterns EF-hand calcium-binding domain. 508 520 IPR018247 -
Bach10g00613 574 SUPERFAMILY Protein kinase-like (PK-like) 100 402 IPR011009 -
Bach10g00613 574 FunFam calcium-dependent protein kinase 28-like 199 392 - -
Bach10g00613 574 Gene3D Transferase(Phosphotransferase) domain 1 199 393 - -
Bach10g00613 574 ProSitePatterns EF-hand calcium-binding domain. 538 550 IPR018247 -
Bach10g00613 574 SMART serkin_6 113 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00613 Bach-Chr10 4373127 4377851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00613 1 567 EF-hand Containing Proteins AT2G17890 74.956 0.0 862
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bach10g00613 Pkinase 3.1e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00613 K13412 - qsa:O6P43_024868 939.873