Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00601 ATGAAGCGGCCAAGGAAATCAAACAGGGTTTCGTGGGCTCCTGGAGTTAATCTGTGTCAGCAGGTAAAGTTGTTCTCGCCTGAAGATTGCCCTTCAAAAGTAGGCCAAAAATTTCAAGATCATCTTCAAGCAAAGGCGTCATTTATATTTCATTCAAGTACTAATGAGTCCAATGATTTACCCCCTGGGTTTGAAGGCAATCATTTTGTGATTCGGCCAAAGGATGAACTCTCCCGCATCCCTTGCATTGAATGGAAATGCCCACCCCAGTTTGTTTTCAGTTATAACTGGCATGTTGCAGCTGGTGAAGAGAGTAGAGAGAAAGAGGATCAAAAGATTAGGGAAATGAGGGTACTTGAAGCAGTTTATCCTCGCCTCTCTGCCATTCCTCCTAGCCCTTCTGTTTCCTTGCATGTGGAAGGGGAAGATTATGACGATAGCTTGACTCCTCTCATCCCTTTGATTCCCATTGAAGAAGAGCCCATGGATATAAACCCTGAAGTGGCAGCAGCAATGGACATCCATGTTGCTACGCAGTCACAAAAATTGCACCAAAATGCGTCAGCAACTTTAACACGCATAAGTTCACAATGTAATAACCCTGCTGCTGTCACCCCAATTGCCTGCGAGAAACCCTTACCAGGTGTATCGTCTGGTTTAAATGCGGATTTAGCCGCGGCCTCTGCTCTAGTAGCTGCTATCATGAACAGTAATGAGCAAGGAAGCTCGATTGATATGGATCTATTGGTTAGGATATTTAAGGACCCAATACTGATTGAGAAACTGATTGCTGATCATAGAATTGATGGGACCACTGAAAATGCTTCCTCAAATACCGTTGGTGTACCTACACCTTCGTTCAGGCCTGCAATTCCATCTGCTCCAATGTCTTTACCTACACCTGATAAGCGGGGTTCAGGGATTTCACCCACAAGTGCACTGGGTTTATTATCTGCTTCTGAGCTGAGGCCAGCGGCTGCTTCAGATTCATTGCTGATGCATACATCTGATAATCCAGCAACTCCATCAGCTCCGTTTTCAAAGTCTATGCCCGAGAAATCAGTAAATATAATTCCATTCTCAAGGCCTGTGCCCGATAAACCAGCAACTACAGTTTCATTCTCCAACCCTGTCCCTGAAAAGCCATCCACTCCCTCATTTCCATTGCCTGCAACTATACCTGATATGCACAGGCCGGTAAACAAAAGCATTCCCCATTTGTCAAATGGTGTGCTGCCCGCTTTAAATACCCTGACTCCTCAACAAGATACTGTTTTGGCATCAGGGGTGAAGCGAGCGTCATCACTGGCTTCCATTTCATCCAGTGAAACAAACATGGTGTCGTTGCCTTTGGCTGGTGGGAACTTGCGTGCAGTGGCAAATCAGGTGCAACCCACAGTGAGTACAATGCCTTACCAACCAATTACAACTTCAACTTCGGCCCTGAAGGAAGCTTATCCTGTGAAGGACGCCAACTATTATAAGAACCTTATTATGCAACATGGTTCAGATAAGCAAGATATACTCGATCCACAAATAGGTATCCGTCATAATAACTTGAAAGATTTGAAAACGGTACATAACCATAAACCATGGGAAGTGAACTTCAAAACTCAGAAACCATGCATATACTTTAACAGTTCAAGGGGGTGCCGAAATGGTTCCAATTGCCCCTATCAGCATGACATGTCTGTTCAGTGGGGAGCTGGTAGCGTCTTAGGGTCCCAGAATTCAAAAAGATTGAAACTAGGACCAGAAATTAAGGGGAGAACATAA 1776 0.4465 MKRPRKSNRVSWAPGVNLCQQVKLFSPEDCPSKVGQKFQDHLQAKASFIFHSSTNESNDLPPGFEGNHFVIRPKDELSRIPCIEWKCPPQFVFSYNWHVAAGEESREKEDQKIREMRVLEAVYPRLSAIPPSPSVSLHVEGEDYDDSLTPLIPLIPIEEEPMDINPEVAAAMDIHVATQSQKLHQNASATLTRISSQCNNPAAVTPIACEKPLPGVSSGLNADLAAASALVAAIMNSNEQGSSIDMDLLVRIFKDPILIEKLIADHRIDGTTENASSNTVGVPTPSFRPAIPSAPMSLPTPDKRGSGISPTSALGLLSASELRPAAASDSLLMHTSDNPATPSAPFSKSMPEKSVNIIPFSRPVPDKPATTVSFSNPVPEKPSTPSFPLPATIPDMHRPVNKSIPHLSNGVLPALNTLTPQQDTVLASGVKRASSLASISSSETNMVSLPLAGGNLRAVANQVQPTVSTMPYQPITTSTSALKEAYPVKDANYYKNLIMQHGSDKQDILDPQIGIRHNNLKDLKTVHNHKPWEVNFKTQKPCIYFNSSRGCRNGSNCPYQHDMSVQWGAGSVLGSQNSKRLKLGPEIKGRT 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00601 591 ProSiteProfiles Zinc finger C3H1-type profile. 536 564 IPR000571 GO:0046872
Bach10g00601 591 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 2 584 - -
Bach10g00601 591 MobiDBLite consensus disorder prediction 332 351 - -
Bach10g00601 591 MobiDBLite consensus disorder prediction 332 350 - -
Bach10g00601 591 MobiDBLite consensus disorder prediction 271 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00601 Bach-Chr10 4285331 4290021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00601 83 153 Homeobox Transcription Factor Family AT4G02560 43.662 6.99e-06 47.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bach10g00601 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00601 - - gmx:102661587 564.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00722 4 4782709 4787794 Bach10g00601 10 4285331 4290021 BWGD
Bach10g00601 10 4285331 4290021 Bach10g00601 10 4285331 4290021 ECH
Bach10g00601 10 4285331 4290021 Bach4g00722 4 4782709 4787794 ECH