Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00599 GTTGGAGTCCTCCTGTGATCGGAGATGTCTTCCACCGGAGAAGGTGATACTGCTCCAGCCGTTGAACAACAACCCGCGGAGGAGGTGAAAGCGCCGCAGGAGGCTAAGCCAGTGAAGGAGAAGAAGCCTAAGGCTCCAAAAGAGAAGAAGAAGCCAAAAGCTGCTGCTCATCCTCCGTACTTTCAGATGATCAAAGAGGCCTTATTGGCCCTGAAGGACAAGGGTGGTTCCAGTCCACATGCCATAGCCAAGTACATGGAGGAGAAGCATAAATCGGTGCTCCCTGCAAATTTCAGGAAGATTTTGGCACTCCAGCTAAAGAACCAAGCTGAGAGAGGAAAACTCATCAAGATTAAGGCATCGTACAAGCTAGCTGAAATTGCTAAGAAGGAAAACGAGAAGGAGAAGAAAAAGGAAACTAAGAAGGAGACAAGGTCCACAACAGAGAAGAAGGAGCGCCCTAAGCGAAAGGCTACGATCACCACCACTTCTGCTGCTGCTCCAAAGGTCAAGTCGACTAAGAAAACAGAGACAACTAACAAGGTTGCTAAACCTGCTAAGAGAGGTGGGGTGAAGAAGATGACACCCACAAAGCCCAAAGTGCCGAAGTCTCTGAGGTCTCCTTCCAAGAGGGCCAGAAAAGCCACTGCTGCATGA 657 0.4947 MSSTGEGDTAPAVEQQPAEEVKAPQEAKPVKEKKPKAPKEKKKPKAAAHPPYFQMIKEALLALKDKGGSSPHAIAKYMEEKHKSVLPANFRKILALQLKNQAERGKLIKIKASYKLAEIAKKENEKEKKKETKKETRSTTEKKERPKRKATITTTSAAAPKVKSTKKTETTNKVAKPAKRGGVKKMTPTKPKVPKSLRSPSKRARKATAA 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00599 210 MobiDBLite consensus disorder prediction 1 52 - -
Bach10g00599 210 PANTHER HISTONE H1 20 204 - -
Bach10g00599 210 PRINTS Histone H5 signature 189 208 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Bach10g00599 210 PRINTS Histone H5 signature 35 56 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Bach10g00599 210 PRINTS Histone H5 signature 62 79 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Bach10g00599 210 PRINTS Histone H5 signature 136 150 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Bach10g00599 210 PRINTS Histone H5 signature 167 184 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Bach10g00599 210 MobiDBLite consensus disorder prediction 196 210 - -
Bach10g00599 210 SUPERFAMILY "Winged helix" DNA-binding domain 46 130 IPR036390 -
Bach10g00599 210 CDD H15 52 117 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bach10g00599 210 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 48 118 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bach10g00599 210 MobiDBLite consensus disorder prediction 118 150 - -
Bach10g00599 210 SMART h15plus2 46 113 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bach10g00599 210 MobiDBLite consensus disorder prediction 151 165 - -
Bach10g00599 210 Coils Coil 119 142 - -
Bach10g00599 210 Gene3D - 43 138 IPR036388 -
Bach10g00599 210 MobiDBLite consensus disorder prediction 118 210 - -
Bach10g00599 210 Pfam linker histone H1 and H5 family 49 116 IPR005818 GO:0000786|GO:0003677|GO:0006334
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00599 Bach-Chr10 4278550 4279331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00599 50 116 Single Myb Histone (SMH) Gene Family AT1G72740 41.791 1.03e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00599 K11275 - gmx:100500169 179.104