Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00593 TGTCCTTCCCCATCATCATCGTAATCAAACCCATTACCAACACCTCCTCCACCGGTAACAGCAGGGCAAAGTAAATCAGAGAAAAACAAAACTATCATATATACCCATATGGATTTGCAATGAAAGTGGGAGGAGGTTCCAATTATGCGAACGCTTTGTGACGCTTGTGAGAGCGCGGCCGCAATCGTGTTCTGCGCTGCTGATGAGGCTGCTCTCTGCCGTGCCTGCGACGAAAAGGTTCACATGTGTAATAAGCTAGCAAGCCGGCATGTAAGAGTTGGTCTTGCAAGTCCAAGTGATGTGCCTCACTGTGACATATGTGAAAATGCACCCGCTTTCTTTTATTGCGAGACGGATGGAAGTTCCCTTTGTTTGCAATGTGATATGATAGTTCATGTTGGAGGTAAAAGAACCCATGGAAGATATCTTCTTTTCAGGCAGAGAGTCGAGTTTCCAGGGGACAAGCCCGGTCAAGGAGAAAATCCAGCTTCACAACCTATGGAACCTGGTGATACTAAAAGAGGACAAAATCCGCTGCCCAAAATGAAAATAGGAGAGAAACAACAAAATCACAGGATGCCTATGGTTCCTACACCAGAACCTGATGCTGATGGGCATGCCAAGATGGAAAATAAAATGATTGATTTGAACATGAAGCCTCACAGGATACACGAACATCCCTCAAATAATGAGCCATAAAATCTAGCAGCTAGTTAGTGCAGTTCTCAGAGGATCTCACGGCAGATATACTCCCTGTTAAAACCCACTTTTGGCAAATGAGGCGTTCGGGCATCAGCTTTGTGGAGTATGCTTGCTTATGTAGCAATTCAATTTGGTAGTTCAATACGATCC 852 0.4484 MRTLCDACESAAAIVFCAADEAALCRACDEKVHMCNKLASRHVRVGLASPSDVPHCDICENAPAFFYCETDGSSLCLQCDMIVHVGGKRTHGRYLLFRQRVEFPGDKPGQGENPASQPMEPGDTKRGQNPLPKMKIGEKQQNHRMPMVPTPEPDADGHAKMENKMIDLNMKPHRIHEHPSNNEP 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00593 184 ProSiteProfiles Zinc finger B-box type profile. 51 96 IPR000315 GO:0008270
Bach10g00593 184 Gene3D Classic Zinc Finger 2 91 - -
Bach10g00593 184 SUPERFAMILY B-box zinc-binding domain 48 86 - -
Bach10g00593 184 FunFam B-box zinc finger protein 19 2 92 - -
Bach10g00593 184 CDD Bbox1_BBX-like 56 96 - -
Bach10g00593 184 SMART bboxneu5 51 96 IPR000315 GO:0008270
Bach10g00593 184 SMART bboxneu5 1 47 IPR000315 GO:0008270
Bach10g00593 184 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Bach10g00593 184 Pfam B-box zinc finger 3 42 IPR000315 GO:0008270
Bach10g00593 184 Pfam B-box zinc finger 53 90 IPR000315 GO:0008270
Bach10g00593 184 MobiDBLite consensus disorder prediction 103 158 - -
Bach10g00593 184 CDD Bbox1_BBX-like 4 47 - -
Bach10g00593 184 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00593 Bach-Chr10 4235126 4237692 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00593 1 182 C2C2-CO-like Transcription Factor Family AT4G38960 60.989 7.44e-76 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Bach10g00593 zf-B_box 9.7e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00593 - - gmx:100780544 362.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g00593 10 4235126 4237692 Bach10g00593 10 4235126 4237692 ECH