Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00590 ATGTTGCTCAAGCTGTTCTTGCTTATATTGCTATGTTGTGAATTTCCTTCTACTTGTTCTCGGATAAATGGGTCCAATGGAACAGTGATGGGTGAACAAGCATACCGTAATTGGGTAAAAGGCTTTGGGTCATCCCAGCACAAGCACTCTCGATTTCAGAAGGCAAAAAAAAAGTTACACCCCTGTCTAACTCTGAAAGTTAATAAGAACCCGAAGTTTGGTAACTTTGTATCAATCCAGAAAGCTATATCTTCTCTTCCACAAGTTAATCGTTGTCGCGTGATCATCTCTATCGGTTCTGGCACTTACAGGGAGAAGGTTGAGATTCCTGCAACTATGGCTTACATTACCTTGGAAGGTGAAAAGGTAGACAAGACAATTATCGAGTGGGATGACACTGCAGACAGAATGGGACAGAGTGGACATCCATTGGGGACCTATGCTTCTGCAACGTTTGCAATCGATGCTCCATACTTCATTGCAAAAAACATCACCTTCAAGAACAGGGCACCAAAACAAGCTGCTGGAGCTGTGGGAAGACAAGCAGTGGCCTCGAGAATTTCTGGTGATGCAGCAGCCTTCATACAATGCAAATTTATTGGAGCACAAGACACGCTATACGATCACGTAGGCAGACACTACTTCAAGGATTGTTACATCGAAGGCTCAATGGATTTCATATTCGGAAACGGTCTCTCACTCTACAAGGACTGCCATTTGCGTGCCATTGCTAGAAGCTATGGAGCCTTGACAGCCCAGAAGAGACAGAACTTCCTTGAGGACACAGGCTTCTCCTTTGTAAACTGCAAGGTCACCGGTTCAGGTGCCCTCTTCCTGGGGAGAGCGTGGGGCACTTTCTCCAGAGTCGTCTTTGCTTACACATACATGGACAAGATTATCATTCCTAGAGGATGGTCCAACTGGGGAGACAAAAACAGGGAAATGACTGTGTTCTATGGACAATACAAATGTTCGGGACCAGGGGCTCATTCTGGAGGGCGTGTCACGTGGTCTAGGGAGCTCACTCAGGAGGAAGCAGCACCATTTCTTTCACTCAATTTTATTGATGCTAGTAAGTGGCTTCATGATCTGATATAA 1098 0.4536 MLLKLFLLILLCCEFPSTCSRINGSNGTVMGEQAYRNWVKGFGSSQHKHSRFQKAKKKLHPCLTLKVNKNPKFGNFVSIQKAISSLPQVNRCRVIISIGSGTYREKVEIPATMAYITLEGEKVDKTIIEWDDTADRMGQSGHPLGTYASATFAIDAPYFIAKNITFKNRAPKQAAGAVGRQAVASRISGDAAAFIQCKFIGAQDTLYDHVGRHYFKDCYIEGSMDFIFGNGLSLYKDCHLRAIARSYGALTAQKRQNFLEDTGFSFVNCKVTGSGALFLGRAWGTFSRVVFAYTYMDKIIIPRGWSNWGDKNREMTVFYGQYKCSGPGAHSGGRVTWSRELTQEEAAPFLSLNFIDASKWLHDLI 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00590 365 FunFam Pectinesterase 62 363 - -
Bach10g00590 365 Gene3D - 63 364 IPR012334 -
Bach10g00590 365 Pfam Pectinesterase 74 357 IPR000070 GO:0030599|GO:0042545
Bach10g00590 365 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 54 361 - -
Bach10g00590 365 SUPERFAMILY Pectin lyase-like 63 361 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00590 Bach-Chr10 4219787 4221219 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00590 2 361 Carbohydrate Esterase AT5G47500 44.321 2.90e-102 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00590 K01051 - tcc:18610811 548.51