Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00588 GAGTTGAGGGAAACTCTAAAGAAGATAATGGAAATCATGACTCGAACAGAAATTCTGAGGGACAAAGTAAAAGTGGACAGAGTTATCTGAAGCAATCAGACAGTGAAGGGACTTCAGGGCAATCTTCTGGACAAAACTGGAGGACTCCAAATGTTAGTAGTTCCTCTAATTGTTTGGTTACTACATCTGCTCCTGCTTCTGTGACAAATCCCTCACCACAAAATCAAGAATTTGATATGCGTAGTCCCACTCCTGTAACTAGTTCCTCGAACTGCTGGGATTCCACATCTGCTTTTGTTTCTGCAGCAAAAACATCACCGCAAAACCCAGAGATTGATTTTCCAGAGTTGCCTAGTCACACCTCTAAACCAAATAATGCTGAATCAATAGGACCAGTTAATGAAAACAATCAGTCTGGTTGTTCAAATGTTCTTGTTCAAGATGCTGGCCCTAGCTGGAGTACTTCTTCCAGCTTAGTCGGTGGTGTAACACCGCTTCCTGAAGTGACTGTTGAATGGAGATGCTCACAGGCTCCACCTAACCCTTCTATTGAGGAGTGGGACTCCAGTCTTGTCTCTACATCTTCATTGAAACCAGTTAAAACTGTTGGCGATTGTGCTGCCACTCCATCTTTGATAAATGAGCAATTAACACACAGCTCACCGTCTCACCCAGCTTGTAATACATCCACATTGCAGGCAATCATTGGCGAACCTAATGAATTTAGATCATTAGTTGATGAATCAGTTTCAGATCTGTTGGCAGAAGTGGAAGCAATGGAGTCTCTCGGTGGTTTGGACTCTCCTACTTCAATCATGCATTGTGGTGAGGAATTAACTGAGGGTTCTAAAACTGATTGTCTCAGTCCAGCAGACGGTCTTAGCCCAATGCCTGATGCAGGTAAAGGTGATGCACTGAGCTTCACAGGTGAGGTACAATTAGCACCTCAATCCACAGCAGCAGAGGAACCATTATGCCAAGCAGAACTACATCATCATCATCGGAGAGTATCTGGGGGGCATTCCTCAACAATTGCTGCAGCTGAGGTTGGTACTAAAAACAGCAGTATTACAGGTAAGCAATGGAAATCAAGTTCAAAAATCCCATCTGCAGTCCCGCCCCCAGCAACCTGGAACTTGGCCAGAGACACCCCTTGGAGACATGGGTTAGAGAGTAGAAGTGGTGGTTGGGGAGTATCTCTGGGAAATGCAAGCATGGGCTGGGATGGAATCGATCAAGCAAATCCAAGCATGGGTTGGGGAGTAGGTCAGCCTCAGGGGGCTGTGCAGGTAAACAGGAACATACACTCATACAGTAGTTCCATGGGAAGTCCAAGTTTATGGGGAAGCCAAGCAAGATATGCCAATAGCAGTGATCGAATTTCTCCTAGAGATCGTGGTTTTCATGATCATGGTAAGGGTAGAAGCGTGTGGAACAGGCAACCACCATTTGGTGTTGCAAATGGGGGCTTCCACAGGCCTCCGCCCAAAGGGCAGCGAGTTTGTAAATTTTATGAAAATGGTTACTGTAAGAAGGGAGCATCATGTGATTATTTGCACCCATAAATGGAGTCTCTCGGTGGTTTGGACTCTCCTACTTCAATCATGCATTGTGGTGAGGAATTAACTGAGGGTTCTAAAACTGATTGTCTCAGTCCAGCAGACGGTCTTAGCCCAATGCCTGATGCAGGTAAAGGTGATGCACTGAGCTTCACAGGTGAGGTACAATTAGCACCTCAATCCACAGCAGCAGAGGAACCATTATGCCAAGCAGAACTACATCATCATCATCGGAGAGTATCTGGGGGGCATTCCTCAACAATTGCTGCAGCTGAGGTTGGTACTAAAAACAGCAGTATTACAGGTAAGCAATGGAAATCAAGTTCAAAAATCCCATCTGCAGTCCCGCCCCCAGCAACCTGGAACTTGGCCAGAGACACCCCTTGGAGACATGGGTTAGAGAGTAGAAGTGGTGGTTGGGGAGTATCTCTGGGAAATGCAAGCATGGGCTGGGATGGAATCGATCAAGCAAATCCAAGCATGGGTTGGGGAGTAGGTCAGCCTCAGGGGGCTGTGCAGGTAAACAGGAACATACACTCATACAGTAGTTCCATGGGAAGTCCAAGTTTATGGGGAAGCCAAGCAAGATATGCCAATAGCAGTGATCGAATTTCTCCTAGAGATCGTGGTTTTCATGATCATGGTAAGGGTAGAAGCGTGTGGAACAGGCAACCACCATTTGGTGTTGCAAATGGGGGCTTCCACAGGCCTCCGCCCAAAGGGCAGCGAGTTTGTAAATTTTATGAAAATGGTTACTGTAAGAAGGGAGCATCATGTGATTATTTGCACCCATAATTTTGAATTCCACACCCATGTGTCACACTCAATTCTTGTAGGTCTTGCGTATATCTGGAAGTTGTCTCTTCCAATTGTTGTAATTTAACCTACGACAGTAATAGGCAAGTGGCATAAAT 2473 0.4581 MESLGGLDSPTSIMHCGEELTEGSKTDCLSPADGLSPMPDAGKGDALSFTGEVQLAPQSTAAEEPLCQAELHHHHRRVSGGHSSTIAAAEVGTKNSSITGKQWKSSSKIPSAVPPPATWNLARDTPWRHGLESRSGGWGVSLGNASMGWDGIDQANPSMGWGVGQPQGAVQVNRNIHSYSSSMGSPSLWGSQARYANSSDRISPRDRGFHDHGKGRSVWNRQPPFGVANGGFHRPPPKGQRVCKFYENGYCKKGASCDYLHP 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00588 262 SUPERFAMILY CCCH zinc finger 237 261 IPR036855 GO:0046872
Bach10g00588 262 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 44-RELATED 1 262 - -
Bach10g00588 262 MobiDBLite consensus disorder prediction 200 217 - -
Bach10g00588 262 MobiDBLite consensus disorder prediction 95 113 - -
Bach10g00588 262 MobiDBLite consensus disorder prediction 199 234 - -
Bach10g00588 262 Gene3D - 233 262 - -
Bach10g00588 262 MobiDBLite consensus disorder prediction 95 117 - -
Bach10g00588 262 ProSiteProfiles Zinc finger C3H1-type profile. 237 262 IPR000571 GO:0046872
Bach10g00588 262 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 239 262 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00588 Bach-Chr10 4207559 4209242 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bach10g00588 zf-CCCH 0.0001 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00588 - - vum:124834891 280.026