Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00585 ATGCTTTACCAAACTCACCATCCTCTTCTCTTTCAATTTCATCCCCTCGCTTCTTCCACCCCTGAATTTGCAACCACTTCATCTCTCTCCTCTGCTTCTCTCTTCTCTCATCTTCCTCTGTTTAAGGCTGAAACAGAAATGGAGTGCGTGGAAGCAGCAGCGTTGAAGACTAGTTTTAGAAAAGACATGGCCATGAAATTAAGCCCACAAGTCTTTATGGAAGAGTTGTCGGCGTTTGATGTGCAAAATGGTGCTCCTTCTGATGATTTTTTTGTCGACGACCTCCTTGACTTTTCGCATGAAGAAGCCCTTATCCAAGAGCAACAACCAGAGGAAGTGGAATTTAAGGGTGCCGCTGTCTCTGTTTCCCCTCAACAAGAGAGCCAAAGCCATGAAATCTCTTGCCTTAGTACTGTCCATGATGATTTTGGGTGTTTGCCTACCAGCGAACTCAGCGTTCCGGCGGATGATTTTGCAGACTTGGAGTGGTTATCTCATTTCGTTGAGGATTCCTTCTCGGAATACTCTGCCGCGTACCCCACCGCAATTTTAACGGAGAAACCCGAGAGCTATGCGGAGAAAGAGCCTGAACAGGAAAGCCATGTTTCGACTCAACCGTGTTTTAAAACTCCGGTTCCGGCCAAGGCCAGAAGCAAGCGAACAAGGACTGGGGTTCGGGTCTGGCCATTTGGTTCCCCTTCGTTCACCGAGTCATCCTCAACCTCTTCCTCTTCATCGTCTTCTTCGTCTCCCCAGAGCCCTTGGTTAATTTACACCAATACCAACCAGAGCCTCGAGCATGTTTCGTCGGAAGCCAAACCCCCAGTGAAGAAACCAAAGAAAAAGCCGGCGTCGGACGGAACGGGGAGCACTGGGGGTCAAACTCCACGACGATGCAGCCATTGTGGTGTCCAGAAGACCCCACAGTGGCGAACCGGTCCGCTTGGAGCCAAAACACTTTGTAACGCATGCGGGGTCCGATACAAGTCGGGTCGGCTCCTACCCGAATATAGACCAGCATGTAGCCCAACATTTTCGAGCGAAGTGCACTCAAACCACCACCGGAAAGTGCTGGAGATGCGGCGGAAGAAGGAATTTATTGGTGGAATTGAGTCCGGTTTGGCCCCTCCTCCGGGTGTCCCCAGTTTTTGA 1152 0.5043 MLYQTHHPLLFQFHPLASSTPEFATTSSLSSASLFSHLPLFKAETEMECVEAAALKTSFRKDMAMKLSPQVFMEELSAFDVQNGAPSDDFFVDDLLDFSHEEALIQEQQPEEVEFKGAAVSVSPQQESQSHEISCLSTVHDDFGCLPTSELSVPADDFADLEWLSHFVEDSFSEYSAAYPTAILTEKPESYAEKEPEQESHVSTQPCFKTPVPAKARSKRTRTGVRVWPFGSPSFTESSSTSSSSSSSSSPQSPWLIYTNTNQSLEHVSSEAKPPVKKPKKKPASDGTGSTGGQTPRRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRLLPEYRPACSPTFSSEVHSNHHRKVLEMRRKKEFIGGIESGLAPPPGVPSF 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00585 383 ProSiteProfiles GATA-type zinc finger domain profile. 293 329 IPR000679 GO:0006355|GO:0043565
Bach10g00585 383 Gene3D - 291 365 IPR013088 GO:0006355|GO:0008270
Bach10g00585 383 MobiDBLite consensus disorder prediction 189 307 - -
Bach10g00585 383 MobiDBLite consensus disorder prediction 232 269 - -
Bach10g00585 383 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 292 355 - -
Bach10g00585 383 ProSitePatterns GATA-type zinc finger domain. 299 324 IPR000679 GO:0006355|GO:0043565
Bach10g00585 383 FunFam GATA transcription factor 290 372 - -
Bach10g00585 383 PANTHER GATA TRANSCRIPTION FACTOR 83 365 - -
Bach10g00585 383 CDD ZnF_GATA 298 346 IPR000679 GO:0006355|GO:0043565
Bach10g00585 383 SMART GATA_3 293 347 IPR000679 GO:0006355|GO:0043565
Bach10g00585 383 MobiDBLite consensus disorder prediction 287 307 - -
Bach10g00585 383 Pfam GATA zinc finger 299 333 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00585 Bach-Chr10 4170213 4171566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00585 50 383 C2C2-Gata Transcription Factor Family AT5G66320 53.509 1.25e-94 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bach10g00585 GATA 5.6e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00585 - - qsa:O6P43_033646 414.075
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00703 4 4654732 4656095 Bach10g00585 10 4170213 4171566 BWGD
Bach10g00585 10 4170213 4171566 Bach4g00703 4 4654732 4656095 ECH
Bach10g00585 10 4170213 4171566 Bach10g00585 10 4170213 4171566 ECH