Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00577 ATGGCGGGTTTATTTTCATTAGGCGGTGGAGGAGGAAGAGGGAGCAGCAACCAAGAGGAAGAGCACCACCACCATCATCATCACCAAGGACATAACCCAGCCACAGAAATTGCTCCTCCAGAGAACTTATTTTGGTACAAGAATAATGAAGATGTTTCCTCTTACAGAGGGTTTGAGCTTTGGCAGCAGCATGAGCAGCTCCTCCCCCAAGCTCAAGCACGACAACTACATACTCATCCACATCCTCAGCAAGATCTTTACTCGTCAGCGGCTGCGTTAGGGGTAGGACCCAGCAGGAGCTCAATCAACGTCTCCGATGATCAGTCATCGTCAAGATCGGGGTTCATGGTGATGCGAAGCAGCGGAGGAATAAGCTGCCAAGACTGTGGTAACCAAGCAAAGAAGGATTGCCCTCACATGCGGTGCAGGACTTGTTGCAAAAGCCGAGGCTTCGATTGTCCAACCCATGTCAAAAGTACTTGGGTTCCAGCTAGTAAGCGACGTGAGCGACAACAGCAGCAGGAGCAGCAACTACAACTTCGCGGAGACAACCCGAAACGACAGCGAGATAATAACCCAAGCTCCTCGGCTCTAGCCTGCACTCGTTTACCCACCAACCCCTCATCCTCAGCGTTAGAGCAAGGAAATTTTCCATCCGTCGTGAGCTCTCCTGCAGAGTTTCGTTGCGTGCGTGTTAGCTCCATGGACGACGCTGACGACCAGTACGCATATCAGACAGCCGTAAACATTGGAGGACATGTTTTCCGAGGAATTCTCTACGACCATGGCCCCGACAATAATTACATGGCATCCGAGGGTTCCCCCGGTGCTATTGGCGTAGTTCAACCTTTGAACCTCATTTCTGCCGCACCAACCTTACCCTCTGGCGGTGGCGATGCTATGGTTTCTTCTACAGGGGCACTTGTGGATCCTTCTTCTTTGTATCCAACTCCACTTAACACCTTCATGGCTGGTAGTGGTACGCAATTCTTCCCACATCCAAGATCTTGA 1011 0.5114 MAGLFSLGGGGGRGSSNQEEEHHHHHHHQGHNPATEIAPPENLFWYKNNEDVSSYRGFELWQQHEQLLPQAQARQLHTHPHPQQDLYSSAAALGVGPSRSSINVSDDQSSSRSGFMVMRSSGGISCQDCGNQAKKDCPHMRCRTCCKSRGFDCPTHVKSTWVPASKRRERQQQQEQQLQLRGDNPKRQRDNNPSSSALACTRLPTNPSSSALEQGNFPSVVSSPAEFRCVRVSSMDDADDQYAYQTAVNIGGHVFRGILYDHGPDNNYMASEGSPGAIGVVQPLNLISAAPTLPSGGGDAMVSSTGALVDPSSLYPTPLNTFMAGSGTQFFPHPRS 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00577 336 MobiDBLite consensus disorder prediction 189 217 - -
Bach10g00577 336 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 21 320 IPR007818 GO:0003700|GO:0006355
Bach10g00577 336 NCBIfam putative zinc finger domain, LRP1 type 125 167 IPR006510 -
Bach10g00577 336 MobiDBLite consensus disorder prediction 163 217 - -
Bach10g00577 336 MobiDBLite consensus disorder prediction 1 38 - -
Bach10g00577 336 Pfam Domain of unknown function (DUF702) 123 265 - -
Bach10g00577 336 NCBIfam LRP1 C-terminal domain 217 264 IPR006511 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00577 Bach-Chr10 4101996 4103648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00577 1 325 C2H2 Transcription Factor Family AT5G66350 48.703 3.40e-89 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Bach10g00577 DUF702 5e-64 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00577 - - qsa:O6P43_024815 400.208