Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00567 ATGTTTTCCAGCAAGGACGTGCCTTCCCCATCTTCAATGTTCTCAGCCTATGCCTCCATGACTGCCTCAGTTATGCTTATGCGTTCAATGGCGAACGATCTGATACCCCCGCCAATTCGAGGGTACCTTGTGAATACATTCCGGTACTTCATCAAACCTCGTTCTCCCATTCTCACCCTTATCATCGAAGAATGCAGTGGCATATCACGCAACCAAGTCTATGATGCAGCAGAGGTTTACTTGTCCACCAGAGTTAGTCCCCTCAATGAAAGGCTCAAGATCTTCAAGAGCCCCAAGGAGAAGAAATTGACCATTCGGCTTGAAAAGGGTGAAAAGATCGTTGATTCCTATGATGGGGTTGGGCTCAACTGGAGATTTATTTGTGCAGAGTCCGAGAAGAATAACCCCAATGATAATAACATAGCTGTCAGATCAGAAAAGCGATATTTCGAGCTCTGTTTCCACAAGAAGCACAAGGAAATGGTGTTGGACAATTATCTGCCATTCATTCTCGATAAAGCCAAGGCCGTGAAAGATGAGGAAAGGACCCTGAAGATGCACACACTAAACACTTCCTACAGTTACAGTGCGGTCAAATGGGATTCCATCAATCTGGAACACCCATCCACTTTTGAGACTCTGGCTATGGAGCCAAAGCTGAAGAAAGATGTGGTTGAAGATTTGAATAGGTTCGTCAAGAGGAAAGATTTCTACAAGAAAGTGGGCAGGGCATGGAAACGTGGGTACTTGCTCTATGGGCCTCCGGGTACTGGAAAATCGAGCTTAATTGCAGCCATGGCTAATTACTTGAAGTTTGACATCTATGACCTGCAACTTGGTAGCATAGTGAGAGATTCCGACCTCAGAAAGTTGCTGCTGGCCACTGCAAATAGATCTATTCTGGTAATTGAAGACATTGATTGCAGTGTGGATTTGCCGGAGCGTACGCGGCATGGGGATGGACGTAAGCCAGCTGACGTACAGTTGACATTATCTGGGTTGCTGAACTTCATAGATGGGCTATGGTCAAGTTGTGGAGATGAGAGAATAATCATATTCACCACAAACCACAAGGAAAGGCTAGACCCAGCTTTGCTGCGACCAGGAAGAATGGACATGCACATTCACATGTCCTATTGCTCCTACCATGGCTTCAAGCTTTTGGCCTCTAATTACTTGGAAATTTCCTCGGAACACCATCATCATCTGTTTGGGGAGATAGAAGGCCTGATAGAGGACACGCAGGTAACCCCTGCACAAGTGGCAGAGGAACTGATGAAGAATGAAGACGCTGATGCTGCACTTGAAGGTTTTGTCAACCTGCTTAAGAGGAAGAAATTAGAAGGTGATGTGTGTGAGAATGATGCTCCAATCAAGCCAGATTTTCAACAACCAAAAAGGAGGAAAGTTGGTAGAAGGCAGAAGAAGGCTGTAGGGGTCAGCACCAGATGTGGTTCGGGTTCACAGAGAAGGACAAGAAGTGGAAACAGTTTGTAA 1497 0.4576 MFSSKDVPSPSSMFSAYASMTASVMLMRSMANDLIPPPIRGYLVNTFRYFIKPRSPILTLIIEECSGISRNQVYDAAEVYLSTRVSPLNERLKIFKSPKEKKLTIRLEKGEKIVDSYDGVGLNWRFICAESEKNNPNDNNIAVRSEKRYFELCFHKKHKEMVLDNYLPFILDKAKAVKDEERTLKMHTLNTSYSYSAVKWDSINLEHPSTFETLAMEPKLKKDVVEDLNRFVKRKDFYKKVGRAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDLQLGSIVRDSDLRKLLLATANRSILVIEDIDCSVDLPERTRHGDGRKPADVQLTLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHIHMSYCSYHGFKLLASNYLEISSEHHHHLFGEIEGLIEDTQVTPAQVAEELMKNEDADAALEGFVNLLKRKKLEGDVCENDAPIKPDFQQPKRRKVGRRQKKAVGVSTRCGSGSQRRTRSGNSL 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00567 498 PANTHER BCS1 AAA-TYPE ATPASE 15 446 - -
Bach10g00567 498 MobiDBLite consensus disorder prediction 481 498 - -
Bach10g00567 498 Pfam ATPase family associated with various cellular activities (AAA) 250 378 IPR003959 GO:0005524|GO:0016887
Bach10g00567 498 SMART AAA_5 245 381 IPR003593 GO:0016887
Bach10g00567 498 Gene3D - 376 450 - -
Bach10g00567 498 Gene3D - 198 375 IPR027417 -
Bach10g00567 498 CDD RecA-like_BCS1 224 377 - -
Bach10g00567 498 ProSitePatterns AAA-protein family signature. 349 367 IPR003960 GO:0005524|GO:0016887
Bach10g00567 498 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 112 430 IPR027417 -
Bach10g00567 498 MobiDBLite consensus disorder prediction 453 467 - -
Bach10g00567 498 MobiDBLite consensus disorder prediction 453 498 - -
Bach10g00567 498 Pfam Domain associated at C-terminal with AAA 35 127 IPR025753 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00567 Bach-Chr10 4040153 4042443 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00567 205 377 Calmodulin-binding Proteins AT3G56690 29.670 2.75e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00567 - - gmx:100789621 796.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g00567 10 4040153 4042443 Bach10g00567 10 4040153 4042443 ECH