Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00564 ATGGCTTTTTCCATGAGATCTTCCATGGGCGGTCTTGCTTCTTCTTTCGCAGGCTTTCGTTCTCCATCTTCATGGTTCGAGCTTTATGCCGCTTTTTCCACATTCATGATGCTCTTGCGTACTGCAATAAACGATTTCATACCCCACCAACTTCGATCTTTGATCGTCTCAAAGCTAGAACTTCTCTTATCCGATCGCCAATCAAAGAGTCTCGTCACACTTGAAATCAATCATCATTGGGATGGGAACATGGGGCCGAGCAACTTACTCTACCATGCTGCCAGAGAGTACCTACCAACAAGGATCACAAACTCTTACAAAGCCCTCAAGGTGGGCAGATTAGGAATGCATAAGAATTTGGTTCTAGCAATTGACGAAAAGCAAGAGGTGGTCGATGAATTTGAAGACATCAAGCTTCATTGGAAGCTAATTCAACCTGTCAAAGATCGGAATCCTAAAATGTTTGACAATGTTGTCGAGCGTTCATTTATACTGAGCTTCCATGAGAGGCATAGAGAGAAGGTGATGAATGAGTATATTCCACACATTTTTCGCACTCAAGAGGCCATGAGAGCGGAGCAGAGGATTGTGAAGATCCATTCCATGAGCTCTGGCCTGTGGAAGACAAGCGACTTAACACACCCAGCAACATTTGACACATTAGCCTTGGATCCTGAGCTAAAGCAATCAATCATCGACGATTTAGAGCTGTTCCTGGAGAGAAAGGAGCTGTACAAGAAAATGGGTAAACCATGGAGACGTGGGTATCTATTATATGGCCCTCCTGGAACTGGTAAATCTAGCCTCATCGCAGCAATCGCCAAAAAATTGAGGTTAGATATATTCGACTTAGAGCTTAGCAGTGTTAAGTCCAACTCAGATCTGAAGAGGACAATGAGCGATATATTCCACCGTTCCATCATTGTCATTGAAGATATAGACTGCATTAAAGAGGTGCATGTTCGATCAAAGGCCAGTGAAGCCTCTATCATTGACTCAGATTTCGACTCTGACTCAATTGCTAAACCTGCTGAGGTTGGCCAAAGGTTTACTCTATCGGCTCTGCTAAATTACATGGACGGTCTTTGGACAAGCTGCGGAGAGGATATAAGAATTGTAATCTTCACCACCAACCATGTAGAGAAACTAGATCCAGCATTGTTGAGACCAGGGCGAATGGACATGCACATTGAATTGCCCTTCTGCAAGCCTGAGGCATTCAGAATCTTGACCACCAATTTCGGCATTGAGAGCCAGCACCCACTGTTGAAACAAATAGATGAGATATTGAAGAAAATAGATGTGACCCCTGCATTATTGGGAGAGCAATTGTTGAGAAATAAGGATCCTGATGTTGCTTTGGAAAAAGTTGTAGAATTCCTCAAGGAAAGAGAGAAGGGAAAGGAGATGGTGAAATAA 1419 0.4341 MAFSMRSSMGGLASSFAGFRSPSSWFELYAAFSTFMMLLRTAINDFIPHQLRSLIVSKLELLLSDRQSKSLVTLEINHHWDGNMGPSNLLYHAAREYLPTRITNSYKALKVGRLGMHKNLVLAIDEKQEVVDEFEDIKLHWKLIQPVKDRNPKMFDNVVERSFILSFHERHREKVMNEYIPHIFRTQEAMRAEQRIVKIHSMSSGLWKTSDLTHPATFDTLALDPELKQSIIDDLELFLERKELYKKMGKPWRRGYLLYGPPGTGKSSLIAAIAKKLRLDIFDLELSSVKSNSDLKRTMSDIFHRSIIVIEDIDCIKEVHVRSKASEASIIDSDFDSDSIAKPAEVGQRFTLSALLNYMDGLWTSCGEDIRIVIFTTNHVEKLDPALLRPGRMDMHIELPFCKPEAFRILTTNFGIESQHPLLKQIDEILKKIDVTPALLGEQLLRNKDPDVALEKVVEFLKEREKGKEMVK 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00564 472 ProSitePatterns AAA-protein family signature. 371 389 IPR003960 GO:0005524|GO:0016887
Bach10g00564 472 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 124 447 IPR027417 -
Bach10g00564 472 PANTHER BCS1 AAA-TYPE ATPASE 30 468 - -
Bach10g00564 472 Gene3D - 398 465 - -
Bach10g00564 472 Gene3D - 208 397 IPR027417 -
Bach10g00564 472 Pfam Domain associated at C-terminal with AAA 47 144 IPR025753 -
Bach10g00564 472 SMART AAA_5 252 403 IPR003593 GO:0016887
Bach10g00564 472 Pfam ATPase family associated with various cellular activities (AAA) 257 400 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00564 Bach-Chr10 4027731 4029234 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00564 254 399 Calmodulin-binding Proteins AT3G56690 29.221 4.08e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00564 - K08900 gmx:100787726 538.11