Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00557 ATGAATGATCTGATGACGAATTCGTTCTTAAGTTATGTTGAATTGAAGAAACAGGTGCAAAAGGACCTTGAAGCCGATCTTGACATTGAAGCAGGGCAACTCAAGTCCATAGAAGACAAGAACCTCTCTCTGCTCTTTCAAGAAGTTGACACAATCAAGGCTAAAATGAAAGAGATTACCAATCCACAGTGTCAAAGTTCTACTGGGCTAAGAGACCGAATGGAATCTGACATGGCTGCCGTTCTTCGCAAAGCAAAGATTATTAAGGCAAGACTACATGGGCTTGACCAATCCAACATAAAAAATCGCACAATATCAGAAGCCTACAAAGACGGAACTCCAATTGATAGAACAAGGATTTCAGTCACAAATGGTTTGAGGGTCAAGCTTGGGCACATGATGAATGATTTTCAGTCCTTGAGAGACAAGATTCTATCTGATCATAAGGAAGATCTCAAGAGAAGGTACTATTCTGCAACAGGGGAGATCCCAAGCGAGGAGATGATGGAAAAGATTATTTCAAGGAGTCTTAAAGTAGAGTCATTTGCTGGGAAAACAGAAGCTGATATGGATACCCAGGTTAGGCACGAAGCTTTGAGGGATATACAGAGAAGTTCAAAAAAGCTTCGCCAGGTTTTCCATGACATGGCTGTTCTGGTTGAGACACAAGGCGAAAAGATAGATGAGATTGAAGAGAATGTAACCCAAGTGAGTAACTTCATCTATGGTGGAACTAATACTCTACTTTCTGCTTCGTTGCAACGTTCACTTCTTGGTGGGACCAAGCTCACGAATTGGCTGCTAGCCAGTAATTTGTAA 819 0.4151 MNDLMTNSFLSYVELKKQVQKDLEADLDIEAGQLKSIEDKNLSLLFQEVDTIKAKMKEITNPQCQSSTGLRDRMESDMAAVLRKAKIIKARLHGLDQSNIKNRTISEAYKDGTPIDRTRISVTNGLRVKLGHMMNDFQSLRDKILSDHKEDLKRRYYSATGEIPSEEMMEKIISRSLKVESFAGKTEADMDTQVRHEALRDIQRSSKKLRQVFHDMAVLVETQGEKIDEIEENVTQVSNFIYGGTNTLLSASLQRSLLGGTKLTNWLLASNL 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00557 272 Gene3D - 32 155 - -
Bach10g00557 272 Pfam Syntaxin 40 224 IPR006011 GO:0016020
Bach10g00557 272 SUPERFAMILY t-snare proteins 41 241 IPR010989 GO:0016020|GO:0016192
Bach10g00557 272 PANTHER SYNTAXIN 41 252 IPR045242 -
Bach10g00557 272 Gene3D - 190 254 - -
Bach10g00557 272 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 189 251 IPR000727 -
Bach10g00557 272 CDD SNARE_syntaxin1-like 191 248 - -
Bach10g00557 272 SMART tSNARE_6 184 251 IPR000727 -
Bach10g00557 272 SMART SynN_4 22 149 IPR006011 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00557 Bach-Chr10 3984852 3985670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00557 1 268 SNARE and Associated Proteins AT2G18260 46.575 3.24e-81 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00557 K08486 - gmx:100779708 343.199