Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00551 GTCGACTTGGTCATGGAGGACCGAGAAAATCCGCTTACCAATTGCTAATAATTTTCTGATTGCCGCGACCCTCTCTCTTTCCCCGAAACTCAGTAATTACAAACAGTTTTCCTGAGAACAGTTGATTACATAATTTTACGTTGGTTTTTTAGGGTAATCGTCATGCTCTCAGAGTCTGCAAAGCTAGCCACAATATTCCGTTGTTTAGTTCTCGATTTCATCAGGGTTGAGTTTCTCTGTCCGGTTGTTGGGCATTCATGATGGAAAGGACATCGCTTCTGATGAAGTGGGTTCTAGAACTTCAGAAATTATGAGCTCCAACACGTGGGGTTATCCCTCAATAAAGTTTCTCTTTAACCGTGGCTTCCTGTTCACCTTGCTTATCTATTGTAGAGCTGCACGGAAGACGCTGTGAAGCTCTGGATTCTGCTGACAATTAATCGAAGGACTTCCGTGCTCTTGTTTTCCAGAACTTGGGTGGCGTTTGTTTGCGGTTTTAGCACTTTGTAGTTGTCGGAAGAGAAGATATTAGCTGAACTTTGTATTATTCGTACTGATAAGAAGACTTGGTTCTGTAAATCAAGGAGGTTGCTTTCTGGTTTCCGCATATTGGTTGTAGGATACTTCTCTGGATGGGAACTGATGTCAATGAAGTGGTGGAGCCATTGCCAAATCCTCGCTCCTTTAAGGTACATCTTAGAATGTGTACAGAACTTATGAAATTAGTTGATAGAATCTCAAGAATATTTCCAGATATAGAGGCAGCTCGGCCTCGATGCTCTTCAGGAATACAGACTCTGTGCCTACTAAACAGTGCAATTGATAAGGCCAAACTTCTTCTGCAATATTGTTGTGAATCTAGTAAACTCTACCTGGCTGTGACAGGGGATGCAATTCTCTCAAGATGCCAGAAAGTGAGAAAATCATTGGAGCAAAGCTTATGTGCAATTCAGAATATGGTTCCAGTTATGTTGGCTGCCGAGATTTCTCAAATAATTGACAATCTTGAGTCTGTGACATTTATCCTGGACAAAGCTGAAGAAGAGGCTGGGAGGGTTATGAGAGAATTGCTCCAGCAAGGCACTTCAGCATCAGAGTCGCTGGAAAATTCTGAAATTAAAGCTCTTAAATTTGCAGCTGCAAGACTTAATATAACAACCCAAAAGGCCATCTTAATAGAGAAAAGATCCATTCAGAAGTTGCTGGATAAAGTTGGATCAAATGATTCAAGCAAAAAGATGATCTTGAGATATCTTTTGTATCTATTGAAAAGGTATGGAAACTCGATTATGGCAGAACAAATGGAGGAGGTCTATACTCATAATGAAGGACCAATTGCAAGTGAGAACTCTACTCATAATTCCTTGCATGGTCATAATATTGAATCAGATCCATGTTCTCACTCTCAGTATGAAACTCACAATGGTGAGTTGAGTAGGCCCCCTGAGGAATATATGTGCCCTATATCTTCAAGAGTGATGTATGATCCTGTTGTCATTGCTTCTGGAGTAACATATGAAAGGATGTGGATAAAGAAGTGGTTTGACGAGGGTAATGATTTATGCCCCAAAACTGGGAAAAAACTGGCCCATATGTCATTGACTCCAAATATTGTTATGAAGGACCTAATATCAAAGTGGTGCAGAAATAATGGAGTCACCATTCCGGATCCAAGTAGGAAAGCTGAAGATTTTCACTCTTGGGAAGTTTCCTCCACTTCCATTAGGAGCTTCGGCAGTTCTATGAATGATTTGCACTTGCTGGCAGATCTTAGTAACATGTCACTTGGATCATTAGAGACTAGTTTTAATTCAGATTCTTCTCATGCCAAGACCACTCACAGCTTGATGAATACCAGTCACAATTCTCGCGGGCAGCAAACTCAAGCACACATACATGATACTGATTTGATGCTTTTGTCTAAACTCCCTGACCTTCAATGGGATTCTCAATGCCAGGTCATTGAAGATCTGAAAAGCTGTTTCAAGTTCAATTACGAAGCTTTTAATTCTGTGTTACCTGAGGATTTCATCAAACCACTCATCAGATTTCTGAGAGATGCATATGATCTGCATGATGTGAGTGCATTGAGGGCTGGAACTCAGGTGCTGTTAGAATTTGTAAGCAATTGCAGAAATGGTCTAACATTTTTGAGTGAAGATACATTCAGTATGTTGGCAAGTCTTCTTGATTCGGAAGTAAGAGGAGAAGCACTTTCCATAATGGAGGAATTTTCTGGCTATGCTAAAATTGCAGTATCCAATGCACTCTCTTCCATTGTAAAGATCCTCGACTCAGAGAGCCAAGAGTACCAACAACGAGCCGTGAGAATAATGTATAATTTGTCCTTCAATGGTGAAATTTGTTCCCCCTTGGTATCCCTTGAGTGCATCCCGAAATTGCTACCATTTTTAACAGACAGGGCCCTGGTGAGATACTGTGTATGTATATTGAAAAACCTTTGTGACACCGAAGAGGGTCGGATTTCTCTTGTTGAAACTAAAGGATGCATATCTTCTGTTGCTCAAATACTCGAGAATGGTAGTAACGAGGAACAAGAACATGCATTGTCTGTACTACTCTCTTTATGCTCTCAACGTGTAGAGTATTGTCAGCTGGTGATGGATGAAGGGGTTATTCCTTCTCTTGTCTATATCTCCAACAATGGAAATGACAGAGGAAAGGCGAATGCATTGGAATTGCTCCGTCTTTTGAGGGATGTTGAATATGTTGAGAATGAAGAAAGCATTCCACCAAATCTAGACACTACACAAGATTCAAACAATCAGCCTCAAGAAAAGAAATCATCGAAGACATCTGGTTTTTTGAAGAAGTTTTCGGTTTTCTCGAAATCCAGCTCACATTCATCCAGAAACAAGAGATGAAACCAGATTCTTCTCCATTTCAACCTGTGTCTTCTTTGAGTTCCTTACTGCGGGGAGTGCAGTTTATCTGCCCGTGAAGACACATTTTGCTTAGCTAGGTAACTAATATAGTTGTTTGGGTGTGCCTTAATCTTTCTAGAAGTCTTACTTTGTCTTATATCTCATCTAGTTGCATTTATTAGCTCTAACTATTCATTTACAATGAGTCTGCTGCTTAATTTTGTACCATAACTGCAGGCTGTCTGATGTATAGTTATGTTAGTTGCAAGGTGTTAC 3161 0.403 MGTDVNEVVEPLPNPRSFKVHLRMCTELMKLVDRISRIFPDIEAARPRCSSGIQTLCLLNSAIDKAKLLLQYCCESSKLYLAVTGDAILSRCQKVRKSLEQSLCAIQNMVPVMLAAEISQIIDNLESVTFILDKAEEEAGRVMRELLQQGTSASESLENSEIKALKFAAARLNITTQKAILIEKRSIQKLLDKVGSNDSSKKMILRYLLYLLKRYGNSIMAEQMEEVYTHNEGPIASENSTHNSLHGHNIESDPCSHSQYETHNGELSRPPEEYMCPISSRVMYDPVVIASGVTYERMWIKKWFDEGNDLCPKTGKKLAHMSLTPNIVMKDLISKWCRNNGVTIPDPSRKAEDFHSWEVSSTSIRSFGSSMNDLHLLADLSNMSLGSLETSFNSDSSHAKTTHSLMNTSHNSRGQQTQAHIHDTDLMLLSKLPDLQWDSQCQVIEDLKSCFKFNYEAFNSVLPEDFIKPLIRFLRDAYDLHDVSALRAGTQVLLEFVSNCRNGLTFLSEDTFSMLASLLDSEVRGEALSIMEEFSGYAKIAVSNALSSIVKILDSESQEYQQRAVRIMYNLSFNGEICSPLVSLECIPKLLPFLTDRALVRYCVCILKNLCDTEEGRISLVETKGCISSVAQILENGSNEEQEHALSVLLSLCSQRVEYCQLVMDEGVIPSLVYISNNGNDRGKANALELLRLLRDVEYVENEESIPPNLDTTQDSNNQPQEKKSSKTSGFLKKFSVFSKSSSHSSRNKR 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00551 750 PANTHER U BOX DOMAIN-CONTAINING 23 698 - -
Bach10g00551 750 MobiDBLite consensus disorder prediction 704 732 - -
Bach10g00551 750 SUPERFAMILY ARM repeat 430 694 IPR016024 -
Bach10g00551 750 ProSiteProfiles U-box domain profile. 269 343 IPR003613 GO:0004842|GO:0016567
Bach10g00551 750 Pfam U-box domain 271 340 IPR003613 GO:0004842|GO:0016567
Bach10g00551 750 MobiDBLite consensus disorder prediction 706 732 - -
Bach10g00551 750 CDD RING-Ubox_PUB 271 323 IPR045210 -
Bach10g00551 750 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 268 344 IPR013083 -
Bach10g00551 750 SMART arm_5 613 654 IPR000225 GO:0005515
Bach10g00551 750 SMART arm_5 534 573 IPR000225 GO:0005515
Bach10g00551 750 SMART arm_5 574 612 IPR000225 GO:0005515
Bach10g00551 750 SMART arm_5 656 696 IPR000225 GO:0005515
Bach10g00551 750 SMART Ubox_2 273 336 IPR003613 GO:0004842|GO:0016567
Bach10g00551 750 Pfam Kinesin-associated protein (KAP) 539 654 - -
Bach10g00551 750 Gene3D - 396 711 IPR011989 -
Bach10g00551 750 MobiDBLite consensus disorder prediction 233 265 - -
Bach10g00551 750 SUPERFAMILY RING/U-box 259 347 - -
Bach10g00551 750 MobiDBLite consensus disorder prediction 233 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00551 Bach-Chr10 3958920 3963846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00551 15 704 U-box Gene Family AT4G36550 41.831 3.74e-162 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00551 - - gmx:100791627 904.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00647 4 4333475 4339914 Bach10g00551 10 3958920 3963846 BWGD
Bach10g00551 10 3958920 3963846 Bach10g00551 10 3958920 3963846 ECH
Bach10g00551 10 3958920 3963846 Bach4g00647 4 4333475 4339914 ECH