Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00548 ATGGAACTGCGAGGCCAAGATAAGGAATTTAAGATGCCAACAACTTTGGGTTATAATCCCAATCCCCCTAAAAGGGATTCCTCTTCCGAGCTCTCTTCTTCAACTCTAGCACCCACCACAGGGGAAAGAAGTGATCATGAACCTCCTCAAACTCCCACAATCTTGCAACCTCAAGAGCACCATAATCTTTATCACCCTCCTCCTCCTTCTCCTCCACTTCAACAATTGCAGAAACCCAGAAGAGATCTAGATCCAAGCTCATCTCCTATTGCCACCACAGGTGTAACCAACACCACAACTGCAATAAGAGCAGCCCCCTCATCACCACTGCCGCCGCCACCGGCACAAACAGGAGCAACATCAACCTCGACAATCTCGACCTCGTTTATTAGGTACCGAGAATGTCTCAAGAATCACGCCGCAAGCATGGGGGGTCATGTAGTGGATGGCTGCGGCGAGTTCATGCCAAGCGGAGAAGAGGGCACCCCAGAATCCTTAAGATGTGCTGCTTGTGAGTGCCACCGGAATTTTCACCGGAAAGAGACTGAAGGTGAGCCTCAGAATGTTTCCAATTATTACAGTTGTTATCCCAACAAAAGCAACGGGATACCTTCTCCTCGTCTTCATTCTCAACATCCTCTTCAGTTTTCTGCTGCCCTATCTTCTCTGCATCAACAACATCATAAGTTCTCACATGGGTACGGCGCCACCCCTTCAGCCGGTCTGATTCCTCCGATAATGATGGCCTTCGGAAGCGGCGGAGGCCCAGCAGAGTCTTCCAGCGAAGATCTCAACATGTTTCAGTCTAATGCCGGAGGCCAACCATCAGTGCAGCCACCACTATCAAAGAAAAGGTTTCGGACCAAGTTTACACCGCAACAAAAGGATAAGATGATGGAGTTTGCTGATAAGTTAGGGTGGAAGATCCAGAAACATGATGAGCAGGAGGTGCAGCAATTTTGTTCCCAAGTGGGTGTGAAAAGGCAGGTCTTCAAGGTCTGGATGCACAATAACAAACAAGCCATGAAGAAGAAGCAAATGTAA 1044 0.4856 MELRGQDKEFKMPTTLGYNPNPPKRDSSSELSSSTLAPTTGERSDHEPPQTPTILQPQEHHNLYHPPPPSPPLQQLQKPRRDLDPSSSPIATTGVTNTTTAIRAAPSSPLPPPPAQTGATSTSTISTSFIRYRECLKNHAASMGGHVVDGCGEFMPSGEEGTPESLRCAACECHRNFHRKETEGEPQNVSNYYSCYPNKSNGIPSPRLHSQHPLQFSAALSSLHQQHHKFSHGYGATPSAGLIPPIMMAFGSGGGPAESSSEDLNMFQSNAGGQPSVQPPLSKKRFRTKFTPQQKDKMMEFADKLGWKIQKHDEQEVQQFCSQVGVKRQVFKVWMHNNKQAMKKKQM 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00548 347 MobiDBLite consensus disorder prediction 20 58 - -
Bach10g00548 347 MobiDBLite consensus disorder prediction 1 97 - -
Bach10g00548 347 MobiDBLite consensus disorder prediction 80 97 - -
Bach10g00548 347 SUPERFAMILY Homeodomain-like 272 344 IPR009057 -
Bach10g00548 347 Gene3D - 268 344 - -
Bach10g00548 347 MobiDBLite consensus disorder prediction 103 122 - -
Bach10g00548 347 Pfam ZF-HD protein dimerisation region 130 182 IPR006456 -
Bach10g00548 347 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 109 340 - -
Bach10g00548 347 NCBIfam homeobox domain, ZF-HD class 283 340 IPR006455 -
Bach10g00548 347 FunFam Zinc-finger homeodomain protein 2 271 344 - -
Bach10g00548 347 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 131 181 IPR006456 -
Bach10g00548 347 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 132 181 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00548 Bach-Chr10 3928036 3929079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00548 42 347 ZF-HD Transcription Factor Family AT2G18350 44.984 2.85e-70 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Bach10g00548 ZF-HD_dimer 3.9e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00548 - - qsa:O6P43_033701 368.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00644 4 4306550 4307590 Bach10g00548 10 3928036 3929079 BWGD
Bach10g00548 10 3928036 3929079 Bach10g00548 10 3928036 3929079 ECH
Bach10g00548 10 3928036 3929079 Bach4g00644 4 4306550 4307590 ECH